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Guanming Wu

Associate Professor

Calculated based on number of publications stored in Pure and citations from Scopus
20032024

Research activity per year

Search results

  • Article

    Abdominal aortic aneurysm is associated with a variant in low-density lipoprotein receptor-related protein 1

    Bown, M. J., Jones, G. T., Harrison, S. C., Wright, B. J., Bumpstead, S., Baas, A. F., Gretarsdottir, S., Badger, S. A., Bradley, D. T., Burnand, K., Child, A. H., Clough, R. E., Cockerill, G., Hafez, H., Scott, D. J. A., Futers, S., Johnson, A., Sohrabi, S., Smith, A., Thompson, M. M., & 461 othersvan Bockxmeer, F. M., Waltham, M., Matthiasson, S. E., Thorleifsson, G., Thorsteinsdottir, U., Blankensteijn, J. D., Teijink, J. A. W., Wijmenga, C., de Graaf, J., Kiemeney, L. A., Assimes, T. L., McPherson, R., Folkersen, L., Franco-Cereceda, A., Palmen, J., Smith, A. J., Sylvius, N., Wild, J. B., Refstrup, M., Edkins, S., Gwilliam, R., Hunt, S. E., Potter, S., Lindholt, J. S., Frikke-Schmidt, R., Tybjærg-Hansen, A., Hughes, A. E., Golledge, J., Norman, P. E., van Rij, A., Powell, J. T., Eriksson, P., Stefansson, K., Thompson, J. R., Humphries, S. E., Sayers, R. D., Deloukas, P., Samani, N. J., Schunkert, H., König, I. R., Kathiresan, S., Reilly, M. P., Holm, H., Preuss, M., Stewart, A. F. R., Barbalic, M., Gieger, C., Absher, D., Aherrahrou, Z., Allayee, H., Altshuler, D., Anand, S. S., Andersen, K., Anderson, J. L., Ardissino, D., Ball, S. G., Balmforth, A. J., Barnes, T. A., Becker, D. M., Becker, L. C., Berger, K., Bis, J. C., Matthijs Boekholdt, S., Boerwinkle, E., Braund, P. S., Susan Burnett, M., Buysschaert, I., Carlquist, J. F., Chen, L., Cichon, S., Codd, V., Davies, R. W., Dedoussis, G., Dehghan, A., Demissie, S., Devaney, J. M., Diemert, P., Do, R., Doering, A., Eifert, S., El Mokhtari, N. E., Ellis, S. G., Elosua, R., Engert, J. C., Epstein, S. E., de Faire, U., Fischer, M., Folsom, A. R., Freyer, J., Gigante, B., Girelli, D., Gudnason, V., Gulcher, J. R., Halperin, E., Hammond, N., Hazen, S. L., Hofman, A., Horne, B. D., Illig, T., Iribarren, C., Wouter Jukema, J., Kaiser, M. A., Kaplan, L. M., Kastelein, J. J. P., Khaw, K. T., Knowles, J. W., Kolovou, G., Kong, A., Laaksonen, R., Lambrechts, D., Leander, K., Lettre, G., Li, M., Lieb, W., Loley, C., Lotery, A. J., Mannucci, P. M., Maouche, S., Martinelli, N., McKeown, P. P., Meisinger, C., Meitinger, T., Melander, O., Angelica Merlini, P., Mooser, V., Morgan, T., Mühleisen, T. W., Muhlestein, J. B., Münzel, T., Musunuru, K., Nahrstaedt, J., Nelson, C. P., Nöthen, M. M., Olivieri, O., Patel, R. S., Patterson, C. C., Peters, A., Peyvandi, F., Qu, L., Quyyumi, A. A., Rader, D. J., Rallidis, L. S., Rice, C., Rosendaal, F. R., Rubin, D., Salomaa, V., Lourdes Sampietro, M., Sandhu, M. S., Schadt, E., Schäfer, A., Schillert, A., Schreiber, S., Schrezenmeir, J., Schwartz, S. M., Siscovick, D. S., Sivananthan, M., Sivapalaratnam, S., Smith, T. B., Snoep, J. D., Soranzo, N., Spertus, J. A., Stark, K., Stirrups, K., Stoll, M., Wilson Tang, W. H., Tennstedt, S., Thorgeirsson, G., Tomaszewski, M., van Rij, A. M., Voight, B. F., Wareham, N. J., Wells, G. A., Wichmann, H. E., Wild, P. S., Willenborg, C., Witteman, J. C. M., Ye, S., Zeller, T., Ziegler, A., Cambien, F., Goodall, A. H., Adrienne Cupples, L., Quertermous, T., März, W., Hengstenberg, C., Blankenberg, S., Ouwehand, W. H., Hall, A. S., Roberts, R., O'Donnell, C. J., Erdmann, J., Newton-Cheh, C., Johnson, T., Gateva, V., Tobin, M. D., Bochud, M., Coin, L., Najjar, S. S., Hua Zhao, J., Heath, S. C., Eyheramendy, S., Papadakis, K., Scott, L. J., Zhang, F., Farrall, M., Tanaka, T., Wallace, C., Chambers, J. C., Nilsson, P., van der Harst, P., Polidoro, S., Grobbee, D. E., Onland-Moret, N. C., Bots, M. L., Wain, L. V., Elliott, K. S., Teumer, A., Luan, J., Lucas, G., Kuusisto, J., Burton, P. R., Hadley, D., McArdle, W. L., Brown, M., Dominiczak, A., Newhouse, S. J., Webster, J., Zeggini, E., Beckmann, J. S., Lim, N., Song, K., Vollenweider, P., Waeber, G., Waterworth, D. M., Yuan, X., Groop, L., Orho-Melander, M., Allione, A., Di Gregorio, A., Guarrera, S., Panico, S., Ricceri, F., Romanazzi, V., Sacerdote, C., Vineis, P., Barroso, I., Luben, R. N., Crawford, G. J., Jousilahti, P., Perola, M., Boehnke, M., Bonnycastle, L. L., Jackson, A. U., Mohlke, K. L., Stringham, H. M., Valle, T. T., Willer, C. J., Bergman, R. N., Morken, M. A., Döring, A., Org, E., Pfeufer, A., Marrugat, J., Subirana, I., Freimer, N. B., Hartikainen, A. L., McCarthy, M. I., O'Reilly, P. F., Peltonen, L., Pouta, A., de Jong, P. E., Snieder, H., van Gilst, W. H., Clarke, R., Goel, A., Hamsten, A., Peden, J. F., Seedorf, U., Syvänen, A. C., Tognoni, G., Lakatta, E. G., Sanna, S., Scheet, P., Schlessinger, D., Scuteri, A., Dörr, M., Ernst, F., Felix, S. B., Homuth, G., Lorbeer, R., Reffelmann, T., Rettig, R., Völker, U., Galan, P., Gut, I. G., Hercberg, S., Mark Lathrop, G., Zelenika, D., Williams, F. M., Zhai, G., Laakso, M., Forouhi, N. G., Völzke, H., Uiterwaal, C. S., van der Schouw, Y. T., Numans, M. E., Matullo, G., Navis, G., Berglund, G., Bingham, S. A., Kooner, J. S., Connell, J. M., Bandinelli, S., Ferrucci, L., Watkins, H., Spector, T. D., Tuomilehto, J., Strachan, D. P., Laan, M., Meneton, P., Uda, M., Jarvelin, M. R., Loos, R. J. F., Elliott, P., Abecasis, G. R., Caulfield, M., Munroe, P. B., Steinthorsdottir, V., Morris, A. P., Dina, C., Welch, R. P., Huth, C., Aulchenko, Y. S., McCulloch, L. J., Ferreira, T., Grallert, H., Amin, N., Wu, G., Raychaudhuri, S., McCarroll, S. A., Langenberg, C., Hofmann, O. M., Dupuis, J., Qi, L., Segrè, A. V., van Hoek, M., Navarro, P., Ardlie, K., Balkau, B., Benediktsson, R., Bennett, A. J., Blagieva, R., Bengtsson Boström, K., Bravenboer, B., Burtt, N. P., Charpentier, G., Chines, P. S., Cornelis, M., Couper, D. J., Crawford, G., Doney, A. S. F., Elliott, A. L., Elliott, A. L., Erdos, M. R., Fox, C. S., Franklin, C. S., Ganser, M., Grarup, N., Green, T., Griffin, S., Groves, C. J., Guiducci, C., Hadjadj, S., Hassanali, N., Herder, C., Isomaa, B., Johnson, P. R. V., Jørgensen, T., Kao, W. H. L., Klopp, N., Kraft, P., Lauritzen, T., Lieverse, A., Lindgren, C. M., Lyssenko, V., Marre, M., Midthjell, K., Narisu, N., Owen, K. R., Payne, F., Perry, J. R. B., Petersen, A. K., Platou, C., Proença, C., Prokopenko, I., Rathmann, W., William Rayner, N., Robertson, N. R., Rocheleau, G., Roden, M., Sampson, M. J., Saxena, R., Shields, B. M., Shrader, P., Sigurdsson, G., Sparsø, T., Strassburger, K., Sun, Q., Swift, A. J., Thorand, B., Tichet, J., Tuomi, T., van Dam, R. M., van Haeften, T. W., van Herpt, T., van Vliet-Ostaptchouk, J. V., Bragi Walters, G., Weedon, M. N., Cauchi, S., Gloyn, A. L., Gyllensten, U., Hansen, T., Hide, W. A., Hitman, G. A., Hunter, D. J., Hveem, K., Morris, A. D., Palmer, C. N. A., Pramstaller, P. P., Rudan, I., Sijbrands, E., Stein, L. D., Uitterlinden, A., Walker, M., Watanabe, R. M., Boehm, B. O., Campbell, H., Daly, M. J., Hattersley, A. T., Hu, F. B., Meigs, J. B., Pankow, J. S., Pedersen, O., Florez, J. C., Frayling, T. M., Sladek, R., Wilson, J. F., Froguel, P., van Duijn, C. M., Blair, R. D., Hill, A. A., Gerry Hill, B., Lewis, D. R., McNoe, L. A., Merriman, T. R., Naik, D. K., Vicky Phillips, L., Thomson, I. A., Topless, R., Vasudevan, T. M. & Yu, G., Nov 11 2011, In: American Journal of Human Genetics. 89, 5, p. 619-627 9 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    155 Scopus citations

  • A controlled vocabulary for pathway entities and events

    Jupe, S., Jassal, B., Williams, M. & Wu, G., 2014, In: Database. 2014

    Research output: Contribution to journal › Article › peer-review

    Open Access
    9 Scopus citations

  • Acute myeloid leukemia–induced T-cell suppression can be reversed by inhibition of the MAPK pathway

    Moshofsky, K. B., Cho, H. J., Wu, G., Romine, K. A., Newman, M. T., Kosaka, Y., McWeeney, S. K. & Lind, E. F., Oct 22 2019, In: Blood Advances. 3, 20, p. 3038-3051 14 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    12 Scopus citations

  • A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns

    PCAWG Tumor Subtypes and Clinical Translation Working Group & PCAWG Consortium, Dec 1 2020, In: Nature communications. 11, 1, 728.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    111 Scopus citations

  • A genome-wide association search for type 2 diabetes genes in african americans

    DIAGRAM Consortium, MAGIC Investigators, Anders Hamsten on behalf of Procardis Consortium, DIAGRAM Consortium, GIANT Consortium, Global BPgen Consortium & for the MAGIC investigators, Jan 4 2012, In: PloS one. 7, 1, e29202.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    142 Scopus citations

  • A human functional protein interaction network and its application to cancer data analysis

    Wu, G., Feng, X. & Stein, L., May 19 2010, In: Genome biology. 11, 5, R53.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    507 Scopus citations

  • Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

    PCAWG Drivers and Functional Interpretation Working Group, PCAWG Structural Variation Working Group & PCAWG Consortium, Feb 6 2020, In: Nature. 578, 7793, p. 102-111 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    332 Scopus citations

  • A network module-based method for identifying cancer prognostic signatures

    Wu, G. & Stein, L., 2012, In: Genome biology. 13, 12, p. R112

    Research output: Contribution to journal › Article › peer-review

    Open Access
    125 Scopus citations

  • Annotating cancer variants and anti-cancer therapeutics in Reactome

    Milacic, M., Haw, R., Rothfels, K., Wu, G., Croft, D., Hermjakob, H., D'Eustachio, P. & Stein, L., Dec 2012, In: Cancers. 4, 4, p. 1180-1211 32 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    233 Scopus citations

  • Automation of ReactomeFIViz via CyREST API

    Wu, G. & Loney, F., 2018, In: F1000Research. 7, 531.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    1 Scopus citations

  • A viral microRNA down-regulates multiple cell cycle genes through mRNA 59′UTRs

    Grey, F., Tirabassi, R., Meyers, H., Wu, G., McWeeney, S., Hook, L. & Nelson, J., Jun 2010, In: PLoS pathogens. 6, 6

    Research output: Contribution to journal › Article › peer-review

    Open Access
    176 Scopus citations

  • Between pathways and networks lies context: Implications for precision medicine

    Laderas, T., Wu, G. & McWeeney, S., Sep 1 2015, In: Science Progress. 98, 3, p. 253-263 11 p.

    Research output: Contribution to journal › Article › peer-review

  • Biology-inspired graph neural network encodes reactome and reveals biochemical reactions of disease

    Burkhart, J. G., Wu, G., Song, X., Raimondi, F., McWeeney, S., Wong, M. H. & Deng, Y., Jul 14 2023, In: Patterns. 4, 7, 100758.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    2 Scopus citations

  • Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis

    PCAWG Drivers and Functional Interpretation Group & PCAWG Consortium, Dec 1 2020, In: Communications Biology. 3, 1, 56.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    129 Scopus citations

  • CIDO ontology updates and secondary analysis of host responses to COVID-19 infection based on ImmPort reports and literature

    Huffman, A., Masci, A. M., Zheng, J., Sanati, N., Brunson, T., Wu, G. & He, Y., Dec 2021, In: Journal of Biomedical Semantics. 12, 1, 18.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    8 Scopus citations

  • Circulating Neoplastic-Immune Hybrid Cells Predict Metastatic Progression in Uveal Melanoma

    Parappilly, M. S., Chin, Y., Whalen, R. M., Anderson, A. N., Robinson, T. S., Strgar, L., Sutton, T. L., Conley, P., Klocke, C., Gibbs, S. L., Chang, Y. H., Wu, G., Wong, M. H. & Skalet, A. H., Oct 2022, In: Cancers. 14, 19, 4617.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    6 Scopus citations

  • Clonal hematopoiesis related TET2 loss-of-function impedes IL1β-mediated epigenetic reprogramming in hematopoietic stem and progenitor cells

    McClatchy, J., Strogantsev, R., Wolfe, E., Lin, H. Y., Mohammadhosseini, M., Davis, B. A., Eden, C., Goldman, D., Fleming, W. H., Conley, P., Wu, G., Cimmino, L., Mohammed, H. & Agarwal, A., Dec 2023, In: Nature communications. 14, 1, 8102.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Combined burden and functional impact tests for cancer driver discovery using DriverPower

    PCAWG Drivers and Functional Interpretation Working Group & PCAWG Consortium, Dec 1 2020, In: Nature communications. 11, 1, 734.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    25 Scopus citations

  • Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing

    PCAWG Structural Variation Working Group & PCAWG Consortium, Mar 1 2020, In: Nature genetics. 52, 3, p. 331-341 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    342 Scopus citations

  • Comprehensive definition of human immunodominant CD8 antigens in tuberculosis

    Lewinsohn, D. A., Swarbrick, G. M., Park, B., Cansler, M. E., Null, M. D., Toren, K. G., Baseke, J., Zalwango, S., Mayanja-Kizza, H., Malone, L. L., Nyendak, M., Wu, G., Guinn, K., McWeeney, S., Mori, T., Chervenak, K. A., Sherman, D. R., Boom, W. H. & Lewinsohn, D. M., Dec 1 2017, In: npj Vaccines. 2, 1, 8.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    37 Scopus citations

  • Comprehensive molecular characterization of mitochondrial genomes in human cancers

    PCAWG Consortium, Mar 1 2020, In: Nature genetics. 52, 3, p. 342-352 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    202 Scopus citations

  • COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms

    the COVID-19 Disease Map Community, Oct 2021, In: Molecular Systems Biology. 17, 10, e10387.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    40 Scopus citations

  • Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer

    PCAWG Structural Variation Working Group & PCAWG Consortium, Mar 1 2020, In: Nature genetics. 52, 3, p. 294-305 12 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    140 Scopus citations

  • Divergent mutational processes distinguish hypoxic and normoxic tumours

    PCAWG Consortium, Dec 1 2020, In: Nature communications. 11, 1, 737.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    79 Scopus citations

  • Genome-wide association identifies nine common variants associated with fasting proinsulin levels and provides new insights into the pathophysiology of type 2 diabetes

    Strawbridge, R. J., Dupuis, J., Prokopenko, I., Barker, A., Ahlqvist, E., Rybin, D., Petrie, J. R., Travers, M. E., Bouatia-Naji, N., Dimas, A. S., Nica, A. C., Wheeler, E., Chen, H., Voight, B. F., Taneera, J., Kanoni, S., Peden, J. F., Turrini, F., Gustafsson, S., Zabena, C., & 670 othersAlmgren, P., Barker, D. J. P., Barnes, D., Dennison, E. M., Eriksson, J. G., Eriksson, P., Eury, E., Folkersen, L., Fox, C. S., Frayling, T. M., Goel, A., Gu, H. F., Horikoshi, M., Isomaa, B., Jackson, A. U., Jameson, K. A., Kajantie, E., Kerr-Conte, J., Kuulasmaa, T., Kuusisto, J., Loos, R. J. F., Luan, J., Makrilakis, K., Manning, A. K., Martínez-Larrad, M. T., Narisu, N., Mannila, M. N., Öhrvik, J., Osmond, C., Pascoe, L., Payne, F., Sayer, A. A., Sennblad, B., Silveira, A., Stančcáková, A., Stirrups, K., Swift, A. J., Syvänen, A. C., Tuomi, T., Van't Hooft, F. M., Walker, M., Weedon, M. N., Xie, W., Zethelius, B., Scott, L. J., Steinthorsdottir, V., Morris, A. P., Dina, C., Welch, R. P., Zeggini, E., Huth, C., Aulchenko, Y. S., Thorleifsson, G., Mcculloch, L. J., Ferreira, T., Grallert, H., Amin, N., Wu, G., Willer, C. J., Raychaudhuri, S., McCarroll, S. A., Hofmann, O. M., Qi, L., Segre, A. V., Van Hoek, M., Navarro, P., Ardlie, K., Balkau, B., Benediktsson, R., Bennett, A. J., Blagieva, R., Boerwinkle, E., Bonnycastle, L. L., Bostrom, K. B., Bravenboer, B., Bumpstead, S., Burtt, N. P., Charpentier, G., Chines, P. S., Cornelis, M., Couper, D. J., Crawford, G., Doney, A. S. F., Elliott, K. S., Elliott, A. L., Erdos, M. R., Franklin, C. S., Ganser, M., Gieger, C., Grarup, N., Green, T., Griffin, S., Groves, C. J., Guiducci, C., Hadjadj, S., Hassanali, N., Herder, C., Johnson, P. R. V., Jorgensen, T., Kao, W. H. L., Klopp, N., Kong, A., Kraft, P., Lauritzen, T., Li, M., Lieverse, A., Lindgren, C. M., Lyssenko, V., Marre, M., Meitinger, T., Midthjell, K., Morken, M. A., Nilsson, P., Owen, K. R., Perry, J. R. B., Petersen, A. K., Platou, C., Proenca, C., Rathmann, W., Rayner, N. W., Robertson, N. R., Rocheleau, G., Roden, M., Sampson, M. J., Saxena, R., Shields, B. M., Shrader, P., Sigurdsson, G., Sparso, T., Strassburger, K., Stringham, H. M., Sun, Q., Thorand, B., Tichet, J., Van Dam, R. M., Van Haeften, T. W., Van Herpt, T., Van Vliet-Ostaptchouk, J. V., Walters, G. B., Wijmenga, C., Witteman, J. C. M., Bergman, R. N., Cauchi, S., Collins, F. S., Gloyn, A. L., Gyllensten, U., Hansen, T., Hide, W. A., Hitman, G. A., Hofman, A., Hunter, D. J., Hveem, K., Laakso, M., Mohlke, K. L., Morris, A. D., Palmer, C. N. A., Pramstaller, P. P., Rudan, I., Sijbrands, E., Stein, L. D., Tuomilehto, J., Uitterlinden, A. G., Wareham, N. J., Watanabe, R. M., Abecasis, G. R., Boehm, B. O., Campbell, H., Daly, M. J., Hattersley, A. T., Hu, F. B., Meigs, J. B., Pankow, J. S., Pedersen, O., Wichmann, H. E., Barroso, I., Groop, L., Sladek, R., Thorsteinsdottir, U., Wilson, J. F., Illig, T., Froguel, P., Van Duijn, C. M., Stefansson, K., Altshuler, D., Boehnke, M., McCarthy, M. I., Speliotes, E. K., Berndt, S. I., Monda, K. L., Allen, H. L., Magi, R., Randall, J. C., Vedantam, S., Winkler, T. W., Workalemahu, T., Heid, I. M., Wood, A. R., Weyant, R. J., Estrada, K., Liang, L., Nemesh, J., Park, J. H., Kilpelainen, T. O., Yang, J., Esko, T., Feitosa, M. F., Kutalik, Z., Mangino, M., Scherag, A., Smith, A. V., Zhao, J. H., Aben, K. K., Absher, D. M., Dixon, A. L., Fisher, E., Glazer, N. L., Goddard, M. E., Heard-Costa, N. L., Hoesel, V., Hottenga, J. J., Johansson, A., Johnson, T., Ketkar, S., Lamina, C., Li, S., Moffatt, M. F., Myers, R. H., Peters, M. J., Preuss, M., Ripatti, S., Rivadeneira, F., Sandholt, C., Timpson, N. J., Tyrer, J. P., Van Wingerden, S., White, C. C., Wiklund, F., Barlassina, C., Chasman, D. I., Cooper, M. N., Jansson, J. O., Lawrence, R. W., Pellikka, N., Shi, J., Thiering, E., Alavere, H., Alibrandi, M. T. S., Arnold, A. M., Aspelund, T., Atwood, L. D., Balmforth, A. J., Ben-Shlomo, Y., Bergmann, S., Biebermann, H., Blakemore, A. I. F., Boes, T., Bornstein, S. R., Brown, M. J., Buchanan, T. A., Busonero, F., Cappuccio, F. P., Cavalcanti-Proenca, C., Chen, Y. D. I., Chen, C. M., Clarke, R., Coin, L., Connell, J., Day, I. N. M., Den Heijer, M., Duan, J., Ebrahim, S., Elliott, P., Elosua, R., Eiriksdottir, G., Facheris, M. F., Felix, S. B., Fischer-Posovszky, P., Folsom, A. R., Friedrich, N., Freimer, N. B., Fu, M., Gaget, S., Gejman, P. V., Geus, E. J. C., Gjesing, A. P., Goyette, P., Grasler, J., Greenawalt, D. M., Gudnason, V., Hartikainen, A. L., Hall, A. S., Havulinna, A. S., Hayward, C., Heath, A. C., Hengstenberg, C., Hicks, A. A., Hinney, A., Homuth, G., Hui, J., Igl, W., Iribarren, C., Jacobs, K. B., Jarick, I., Jewell, E., John, U., Jousilahti, P., Jula, A., Kaakinen, M., Kaplan, L. M., Kathiresan, S., Kettunen, J., Kinnunen, L., Knowles, J. W., Kolcic, I., König, I. R., Koskinen, S., Kovacs, P., Kvaloy, K., Laitinen, J., Lantieri, O., Lanzani, C., Launer, L. J., Lecoeur, C., Lehtimaki, T., Lettre, G., Liu, J., Lokki, M. L., Lorentzon, M., Luben, R. N., Ludwig, B., Manunta, P., Marek, D., Martin, N. G., McArdle, W. L., McCarthy, A., McKnight, B., Melander, O., Meyre, D., Montgomery, G. W., Mulic, R., Ngwa, J. S., Nelis, M., Neville, M. J., Nyholt, D. R., O'Donnell, C. J., O'Rahilly, S., Ong, K. K., Oostra, B., Pare, G., Parker, A. N., Perola, M., Pichler, I., Pietilainen, K. H., Platou, C. G. P., Polasek, O., Pouta, A., Rafelt, S., Raitakari, O., Rayner, N. W., Ridderstrale, M., Rief, W., Ruokonen, A., Rzehak, P., Salomaa, V., Sanders, A. R., Sandhu, M. S., Sanna, S., Saramies, J., Savolainen, M. J., Scherag, S., Schipf, S., Schreiber, S., Schunkert, H., Silander, K., Sinisalo, J., Siscovick, D. S., Smit, J. H., Soranzo, N., Sovio, U., Stephens, J., Surakka, I., Tammesoo, M. L., Tardif, J. C., Teder-Laving, M., Teslovich, T. M., Thompson, J. R., Thomson, B., Tonjes, A., Van Meurs, J. B. J., Van Ommen, G. J., Vatin, V., Viikari, J., Visvikis-Siest, S., Vitart, V., Vogel, C. I. G., Waite, L. L., Wallaschofski, H., Widen, E., Wiegand, S., Wild, S. H., Willemsen, G., Witte, D. R., Xu, J., Zhang, Q., Zgaga, L., Ziegler, A., Zitting, P., Beilby, J. P., Farooqi, I. S., Hebebrand, J., Huikuri, H. V., James, A. L., Kahonen, M., Levinson, D. F., Macciardi, F., Nieminen, M. S., Ohlsson, C., Palmer, L. J., Ridker, P. M., Stumvoll, M., Beckmann, J. S., Boeing, H., Boomsma, D. I., Caulfield, M. J., Chanock, S. J., Cupples, L. A., Smith, G. D., Erdmann, J., Gronberg, H., Hall, P., Harris, T. B., Hayes, R. B., Heinrich, J., Jarvelin, M. R., Kaprio, J., Karpe, F., Khaw, K. T., Kiemeney, L. A., Krude, H., Lawlor, D. A., Metspalu, A., Munroe, P. B., Ouwehand, W. H., Penninx, B. W., Peters, A., Quertermous, T., Reinehr, T., Rissanen, A., Samani, N. J., Schwarz, P. E. H., Shuldiner, A. R., Spector, T. D., Uda, M., Valle, T. T., Wabitsch, M., Waeber, G., Watkins, H., Wright, A. F., Zillikens, M. C., Chatterjee, N., Purcell, S., Schadt, E. E., Visscher, P. M., Assimes, T. L., Borecki, I. B., Deloukas, P., Haritunians, T., Kaplan, R. C., O'Connell, J. R., Peltonen, L., Schlessinger, D., Strachan, D. P., North, K. E., Hirschhorn, J. N., Ingelsson, E., Parts, L., Glass, D., Nisbet, J., Barrett, A., Sekowska, M., Potter, S., Grundberg, E., Small, K., Hedman, A. K., Bataille, V., Bell, J. T., Surdulescu, G., Ingle, C., Nestle, F. O., Di Meglio, P., Min, J. L., Wilk, A., Hammond, C. J., Yang, T. P., Montgomery, S. B., Zondervan, K. T., Durbin, R., Ahmadi, K., Dermitzakis, E. T., Reilly, M. P., Holm, H., Stewart, A. F. R., Barbalic, M., Aherrahrou, Z., Allayee, H., Anand, S. S., Andersen, K., Anderson, J. L., Ardissino, D., Ball, S. G., Barnes, T. A., Becker, D. M., Becker, L. C., Berger, K., Bis, J. C., Boekholdt, S. M., Braund, P. S., Burnett, M. S., Buysschaert, I., Carlquist, J. F., Chen, L., Codd, V., Davies, R. W., Cichon, S., Dedoussis, G. V., Demissie, S., Dehghan, A., Devaney, J. M., Diemert, P., Do, R., Doering, A., Eifert, S., El Mokhtari, N. E., Ellis, S. G., Engert, J. C., Epstein, S. E., De Faire, U., Fischer, M., Freyer, J., Gigante, B., Girelli, D., Gretarsdottir, S., Gulcher, J. R., Halperin, E., Hammond, N., Hazen, S. L., Horne, B. D., Jones, G. T., Jukema, J. W., Kaiser, M. A., Kastelein, J. J. P., Kolovou, G., Laaksonen, R., Lambrechts, D., Leander, K., Li, M., Lieb, W., Loley, C., Lotery, A. J., Mannucci, P. M., Maouche, S., Martinelli, N., McKeown, P. P., Meisinger, C., Merlini, P. A., Mooser, V., Morgan, T., Mühleisen, T. W., Muhlestein, J. B., Münzel, T., Musunuru, K., Nahrstaedt, J., Nelson, C. P., Nöthen, M. M., Olivieri, O., Patel, R. S., Patterson, C. C., Peyvandi, F., Qu, L., Quyyumi, A. A., Rader, D. J., Rallidis, L. S., Rice, C., Rosendaal, F. R., Rubin, D., Sampietro, M. L., Sandhu, M. S., Schäfer, A., Schillert, A., Schrezenmeir, J., Schwartz, S. M., Sivananthan, M., Sivapalaratnam, S., Smith, T. B., Snoep, J. D., Spertus, J. A., Stark, K., Stoll, M., Wilson Tang, W. H., Tennstedt, S., Thorgeirsson, G., Tomaszewski, M., Van Rij, A. M., Wells, G. A., Wild, P. S., Willenborg, C., Wright, B. J., Ye, S., Zeller, T., Cambien, F., Goodall, A. H., Marz, W., Blankenberg, S., Roberts, R., McPherson, R., Hopewell, J. C., Parish, S., Offer, A., Bowman, L., Sleight, P., Armitage, J., Peto, R., Collins, R., Chambers, J. C., Ahmed, N., Donnelly, P., Kooner, A. S., Scott, J., Sehmi, J., Zhang, W., Kooner, J., Sabater-Lleal, M., Mälarstig, A., Hellénius, M. L., Olsson, G., Rust, S., Assmann, G., Seedorf, U., Barlera, S., Tognoni, G., Franzosi, M. G., Linksted, P., Ongen, H., Kyriakou, T., Green, F., Farrall, M., Saleheen, D., Rasheed, A., Zaidi, M., Shah, N., Samuel, M., Mallick, N., Azhar, M., Zaman, K., Samad, A., Ishaq, M., Gardezi, A., Memon, F. U. R., Frossard, P., Danesh, J., Östenson, C. G., Lind, L., Cooper, C. C., Serrano-Ríos, M., Ferrannini, E., Forsen, T. J., Pattou, F., Langenberg, C., Hamsten, A. & Florez, J. C., Oct 1 2011, In: Diabetes. 60, 10, p. 2624-2634 11 p.

    Research output: Contribution to journal › Article › peer-review

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    289 Scopus citations

  • Genomic footprints of activated telomere maintenance mechanisms in cancer

    PCAWG Structural Variation Working Group & PCAWG Consortium, Dec 1 2020, In: Nature communications. 11, 1, 733.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    69 Scopus citations

  • Gramene 2013: Comparative plant genomics resources

    Monaco, M. K., Stein, J., Naithani, S., Wei, S., Dharmawardhana, P., Kumari, S., Amarasinghe, V., Youens-Clark, K., Thomason, J., Preece, J., Pasternak, S., Olson, A., Jiao, Y., Lu, Z., Bolser, D., Kerhornou, A., Staines, D., Walts, B., Wu, G., D'Eustachio, P., & 6 othersHaw, R., Croft, D., Kersey, P. J., Stein, L., Jaiswal, P. & Ware, D., Jan 1 2014, In: Nucleic acids research. 42, D1, p. D1193-D1199

    Research output: Contribution to journal › Article › peer-review

    Open Access
    149 Scopus citations

  • High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations

    PCAWG Transcriptome Working Group, PCAWG Structural Variation Working Group & PCAWG Consortium, Dec 1 2020, In: Nature communications. 11, 1, 736.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    45 Scopus citations

  • Identification of a Therapeutic Strategy Targeting Amplified FGF19 in Liver Cancer by Oncogenomic Screening

    Sawey, E. T., Chanrion, M., Cai, C., Wu, G., Zhang, J., Zender, L., Zhao, A., Busuttil, R. W., Yee, H., Stein, L., French, D. M., Finn, R. S., Lowe, S. W. & Powers, S., Mar 8 2011, In: Cancer Cell. 19, 3, p. 347-358 12 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    348 Scopus citations

  • Illuminate the Functions of Dark Proteins Using the Reactome-IDG Web Portal

    Beavers, D., Brunson, T., Sanati, N., Matthews, L., Haw, R., Shorser, S., Sevilla, C., Viteri, G., Conley, P., Rothfels, K., Hermjakob, H., Stein, L., D'Eustachio, P. & Wu, G., Jul 2023, In: Current Protocols. 3, 7, e845.

    Research output: Contribution to journal › Article › peer-review

    1 Scopus citations

  • Integrative analysis of drug response and clinical outcome in acute myeloid leukemia

    Bottomly, D., Long, N., Schultz, A. R., Kurtz, S. E., Tognon, C. E., Johnson, K., Abel, M., Agarwal, A., Avaylon, S., Benton, E., Blucher, A., Borate, U., Braun, T. P., Brown, J., Bryant, J., Burke, R., Carlos, A., Chang, B. H., Cho, H. J., Christy, S., & 74 othersCoblentz, C., Cohen, A. M., d'Almeida, A., Cook, R., Danilov, A., Dao, K. H. T., Degnin, M., Dibb, J., Eide, C. A., English, I., Hagler, S., Harrelson, H., Henson, R., Ho, H., Joshi, S. K., Junio, B., Kaempf, A., Kosaka, Y., Laderas, T., Lawhead, M., Lee, H., Leonard, J. T., Lin, C., Lind, E. F., Liu, S. Q., Lo, P., Loriaux, M. M., Luty, S., Maxson, J. E., Macey, T., Martinez, J., Minnier, J., Monteblanco, A., Mori, M., Morrow, Q., Nelson, D., Ramsdill, J., Rofelty, A., Rogers, A., Romine, K. A., Ryabinin, P., Saultz, J. N., Sampson, D. A., Savage, S. L., Schuff, R., Searles, R., Smith, R. L., Spurgeon, S. E., Sweeney, T., Swords, R. T., Thapa, A., Thiel-Klare, K., Traer, E., Wagner, J., Wilmot, B., Wolf, J., Wu, G., Yates, A., Zhang, H., Cogle, C. R., Collins, R. H., Deininger, M. W., Hourigan, C. S., Jordan, C. T., Lin, T. L., Martinez, M. E., Pallapati, R. R., Pollyea, D. A., Pomicter, A. D., Watts, J. M., Weir, S. J., Druker, B. J., McWeeney, S. K. & Tyner, J. W., Aug 8 2022, In: Cancer Cell. 40, 8, p. 850-864.e9

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    Open Access
    63 Scopus citations

  • Integrative pathway enrichment analysis of multivariate omics data

    PCAWG Drivers and Functional Interpretation Working Group & PCAWG Consortium, Dec 1 2020, In: Nature communications. 11, 1, 735.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    92 Scopus citations

  • Leveraging biochemical reactions to unravel functional impacts of cancer somatic variants affecting protein interaction interfaces

    Raimondi, F., Wu, G., Burkhart, J. G., Betts, M. J. & Russell, R. B., 2022, In: F1000Research. 10, 1111.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Leveraging biochemical reactions to unravel functional impacts of cancer somatic variants affecting protein interaction interfaces

    Raimondi, F., Burkhart, J. G., Betts, M. J., Russell, R. B. & Wu, G., 2021, In: F1000Research. 10, p. 1111 1 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Manic fringe promotes a claudin-low breast cancer phenotype through notch-mediated PIK3CG induction

    Zhang, S., Chung, W. C., Wu, G., Egan, S. E., Miele, L. & Xu, K., May 15 2015, In: Cancer Research. 75, 10, p. 1936-1943 8 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    53 Scopus citations

  • Meta-Analysis of Genome-Wide Association Studies in African Americans Provides Insights into the Genetic Architecture of Type 2 Diabetes

    The MAGIC investigators & The GIANT consortium, Aug 7 2014, In: PLoS genetics. 10, 8, e1004517.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    166 Scopus citations

  • Natural product target network reveals potential for cancer combination therapies

    Chamberlin, S. R., Blucher, A., Wu, G., Shinto, L., Choonoo, G., Kulesz-Martin, M. & McWeeney, S., 2019, In: Frontiers in Pharmacology. 10, MAY, 557.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    42 Scopus citations

  • Network-based predictors of progression in head and neck squamous cell carcinoma

    Sanati, N., Iancu, O. D., Wu, G., Jacobs, J. E. & McWeeney, S. K., May 29 2018, In: Frontiers in Genetics. 9, MAY, 183.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    21 Scopus citations

  • Pan-cancer analysis of whole genomes

    The ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium, Feb 6 2020, In: Nature. 578, 7793, p. 82-93 12 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    1534 Scopus citations

  • Pathway and network analysis of more than 2500 whole cancer genomes

    PCAWG Drivers and Functional Interpretation Working Group & PCAWG Consortium, Dec 1 2020, In: Nature communications. 11, 1, 729.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    62 Scopus citations

  • Plant Reactome: A resource for plant pathways and comparative analysis

    Naithani, S., Preece, J., D'Eustachio, P., Gupta, P., Amarasinghe, V., Dharmawardhana, P. D., Wu, G., Fabregat, A., Elser, J. L., Weiser, J., Keays, M., Fuentes, A. M. P., Petryszak, R., Stein, L. D., Ware, D. & Jaiswal, P., Jan 1 2017, In: Nucleic acids research. 45, D1, p. D1029-D1039

    Research output: Contribution to journal › Article › peer-review

    Open Access
    54 Scopus citations

  • Reactome: A database of reactions, pathways and biological processes

    Croft, D., O'Kelly, G., Wu, G., Haw, R., Gillespie, M., Matthews, L., Caudy, M., Garapati, P., Gopinath, G., Jassal, B., Jupe, S., Kalatskaya, I., MayMahajan, S., May, B., Ndegwa, N., Schmidt, E., Shamovsky, V., Yung, C., Birney, E., Hermjakob, H., & 2 othersD'Eustachio, P. & Stein, L., Jan 2011, In: Nucleic acids research. 39, SUPPL. 1, p. D691-D697

    Research output: Contribution to journal › Article › peer-review

    Open Access
    1202 Scopus citations

  • Reactome: A knowledge base of biologic pathways and processes

    Vastrik, I., D'Eustachio, P., Schmidt, E., Joshi-Tope, G., Gopinath, G., Croft, D., de Bono, B., Gillespie, M., Jassal, B., Lewis, S., Matthews, L., Wu, G., Birney, E. & Stein, L., Mar 16 2007, In: Genome biology. 8, 3, R39.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    496 Scopus citations

  • Reactome: A knowledgebase of biological pathways

    Joshi-Tope, G., Gillespie, M., Vastrik, I., D'Eustachio, P., Schmidt, E., de Bono, B., Jassal, B., Gopinath, G. R., Wu, G. R., Matthews, L., Lewis, S., Birney, E. & Stein, L., Jan 1 2005, In: Nucleic acids research. 33, DATABASE ISS., p. D428-D432

    Research output: Contribution to journal › Article › peer-review

    Open Access
    1052 Scopus citations

  • Reactome and ORCID-fine-grained credit attribution for community curation

    Viteri, G., Matthews, L., Varusai, T., Gillespie, M., Milacic, M., Cook, J., Weiser, J., Shorser, S., Sidiropoulos, K., Fabregat, A., Haw, R., Wu, G., Stein, L., D'Eustachio, P. & Hermjakob, H., Jan 1 2019, In: Database : the journal of biological databases and curation. 2019

    Research output: Contribution to journal › Article › peer-review

    Open Access
    8 Scopus citations

  • ReactomeFIViz: A cytoscape app for pathway and network-based data analysis

    Wu, G., Dawson, E., Duong, A., Haw, R. & Stein, L., Sep 12 2014, In: F1000Research. 3, 4431.2.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    173 Scopus citations

  • Reactome from a WikiPathways Perspective

    Bohler, A., Wu, G., Kutmon, M., Pradhana, L. A., Coort, S. L., Hanspers, K., Haw, R., Pico, A. R. & Evelo, C. T., May 2016, In: PLoS computational biology. 12, 5, e1004941.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    30 Scopus citations

  • Reactome graph database: Efficient access to complex pathway data

    Fabregat, A., Korninger, F., Viteri, G., Sidiropoulos, K., Marin-Garcia, P., Ping, P., Wu, G., Stein, L., D’Eustachio, P. & Hermjakob, H., Jan 2018, In: PLoS computational biology. 14, 1, e1005968.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    165 Scopus citations

  • Reactome knowledgebase of human biological pathways and processes

    Matthews, L., Gopinath, G., Gillespie, M., Caudy, M., Croft, D., de Bono, B., Garapati, P., Hemish, J., Hermjakob, H., Jassal, B., Kanapin, A., Lewis, S., Mahajan, S., May, B., Schmidt, E., Vastrik, I., Wu, G., Birney, E., Stein, L. & D'eustachio, P., 2009, In: Nucleic acids research. 37, SUPPL. 1, p. D619-D622

    Research output: Contribution to journal › Article › peer-review

    Open Access
    689 Scopus citations

  • Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples

    MC3 Working Group, PCAWG novel somatic mutation calling methods working group & PCAWG Consortium, Dec 1 2020, In: Nature communications. 11, 1, 4748.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    25 Scopus citations