TY - JOUR
T1 - Chronic heavy drinking drives distinct transcriptional and epigenetic changes in splenic macrophages
AU - Sureshchandra, Suhas
AU - Stull, Cara
AU - Ligh, Brian Jin Kee
AU - Nguyen, Selene Bich
AU - Grant, Kathleen A.
AU - Messaoudi, Ilhem
N1 - Funding Information:
This work was funded by National Institutes for health (NIH) and National Institute on Alcohol Abuse and Alcoholism (NIAAA) grants - NIH 8P51 ODO11092-533, NIH/NIAAA R24AA019431 , U01 AA13641, U01 AA13510 and NIH/NIAAA R21AA021947 and R21AA025839 . The funding agencies had no role in the study design, data collection, data analysis, interpretation, or writing of the manuscript.
Funding Information:
The authors wish to thank the members of the Grant lab and Oregon National Primate Research Center for the animal work and sample collection. We thank Ms. Nicole Walters for critical reading of the manuscript and Ms. Maham Rais (University of California Riverside)for assistance with cell separations and ATAC-Seq library preparation. This work was funded by National Institutes for health (NIH)and National Institute on Alcohol Abuse and Alcoholism (NIAAA)grants - NIH 8P51 ODO11092-533, NIH/NIAAA R24AA019431, U01 AA13641, U01 AA13510 and NIH/NIAAA R21AA021947 and R21AA025839. The funding agencies had no role in the study design, data collection, data analysis, interpretation, or writing of the manuscript. The authors declare no competing interests. I.M and K.G designed the study. S?S, S.B.?N, and C?S performed the experiments. S?S, S.B.?N, and B.J.L analysed the data. S?S, I.M, and K.G wrote the manuscript. All authors have read and approved the final version of the manuscript.
Publisher Copyright:
© 2019
PY - 2019/5
Y1 - 2019/5
N2 - Background: Chronic heavy alcohol drinking (CHD)leads to significant organ damage, increased susceptibility to infections, and delayed wound healing. These adverse outcomes are believed to be mediated by alterations in the function of myeloid cells; however, the mechanisms underlying these changes are poorly understood. Methods: We determined the impact of CHD on the phenotype of splenic macrophages using flow cytometry. Changes in functional responses to LPS were measured using luminex and RNA-Seq. Finally, alterations in chromatin accessibility were uncovered using ATAC-Seq. Findings: A history of CHD led to increased frequency of splenic macrophages that exhibited a heightened activation state at resting. Additionally, splenic macrophages from CHD animals generated a larger inflammatory response to LPS, both at protein and gene expression levels. Finally, CHD resulted in increased levels of H3K4me3, a histone mark of active promoters, as well as chromatin accessibility at promoters and intergenic regions that regulate inflammatory responses. Interpretation: These findings suggest that a history of CHD alters the immune fitness of tissue-resident macrophages via epigenetic mechanisms. Fund: National Institute on Alcohol Abuse and Alcoholism (NIAAA), National Institutes of Health (NIH)- R24AA019431, U01 AA13641, U01 AA13510, R21AA021947, and R21AA025839.
AB - Background: Chronic heavy alcohol drinking (CHD)leads to significant organ damage, increased susceptibility to infections, and delayed wound healing. These adverse outcomes are believed to be mediated by alterations in the function of myeloid cells; however, the mechanisms underlying these changes are poorly understood. Methods: We determined the impact of CHD on the phenotype of splenic macrophages using flow cytometry. Changes in functional responses to LPS were measured using luminex and RNA-Seq. Finally, alterations in chromatin accessibility were uncovered using ATAC-Seq. Findings: A history of CHD led to increased frequency of splenic macrophages that exhibited a heightened activation state at resting. Additionally, splenic macrophages from CHD animals generated a larger inflammatory response to LPS, both at protein and gene expression levels. Finally, CHD resulted in increased levels of H3K4me3, a histone mark of active promoters, as well as chromatin accessibility at promoters and intergenic regions that regulate inflammatory responses. Interpretation: These findings suggest that a history of CHD alters the immune fitness of tissue-resident macrophages via epigenetic mechanisms. Fund: National Institute on Alcohol Abuse and Alcoholism (NIAAA), National Institutes of Health (NIH)- R24AA019431, U01 AA13641, U01 AA13510, R21AA021947, and R21AA025839.
KW - Chromatin accessibility
KW - Chronic heavy drinking
KW - Ethanol
KW - LPS
KW - Rhesus macaques
KW - Splenic macrophages
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U2 - 10.1016/j.ebiom.2019.04.027
DO - 10.1016/j.ebiom.2019.04.027
M3 - Article
C2 - 31005514
AN - SCOPUS:85064322051
SN - 2352-3964
VL - 43
SP - 594
EP - 606
JO - EBioMedicine
JF - EBioMedicine
ER -