A framework for future national pediatric pandemic respiratory disease severity triage: The HHS pediatric COVID-19 data challenge

Timothy Bergquist, Marie Wax, Tellen D. Bennett, Richard A. Moffitt, Jifan Gao, Guanhua Chen, Amalio Telenti, M. Cyrus Maher, Istvan Bartha, Lorne Walker, Benjamin E. Orwoll, Meenakshi Mishra, Joy Alamgir, Bruce L. Cragin, Christopher H. Ferguson, Hui Hsing Wong, Anne Deslattes Mays, Leonie Misquitta, Kerry A. Demarco, Kimberly L. SciarrettaSandeep A. Patel

Research output: Contribution to journalArticlepeer-review

1 Scopus citations

Abstract

Introduction: With persistent incidence, incomplete vaccination rates, confounding respiratory illnesses, and few therapeutic interventions available, COVID-19 continues to be a burden on the pediatric population. During a surge, it is difficult for hospitals to direct limited healthcare resources effectively. While the overwhelming majority of pediatric infections are mild, there have been life-threatening exceptions that illuminated the need to proactively identify pediatric patients at risk of severe COVID-19 and other respiratory infectious diseases. However, a nationwide capability for developing validated computational tools to identify pediatric patients at risk using real-world data does not exist. Methods: HHS ASPR BARDA sought, through the power of competition in a challenge, to create computational models to address two clinically important questions using the National COVID Cohort Collaborative: (1) Of pediatric patients who test positive for COVID-19 in an outpatient setting, who are at risk for hospitalization? (2) Of pediatric patients who test positive for COVID-19 and are hospitalized, who are at risk for needing mechanical ventilation or cardiovascular interventions? Results: This challenge was the first, multi-agency, coordinated computational challenge carried out by the federal government as a response to a public health emergency. Fifty-five computational models were evaluated across both tasks and two winners and three honorable mentions were selected. Conclusion: This challenge serves as a framework for how the government, research communities, and large data repositories can be brought together to source solutions when resources are strapped during a pandemic.

Original languageEnglish (US)
Article numbere175
JournalJournal of Clinical and Translational Science
Volume7
Issue number1
DOIs
StatePublished - Jul 10 2023

Keywords

  • COVID-19
  • Pediatrics
  • community challenges
  • evaluation
  • machine learning

ASJC Scopus subject areas

  • General Medicine

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