TY - JOUR
T1 - A framework for future national pediatric pandemic respiratory disease severity triage
T2 - The HHS pediatric COVID-19 data challenge
AU - Bergquist, Timothy
AU - Wax, Marie
AU - Bennett, Tellen D.
AU - Moffitt, Richard A.
AU - Gao, Jifan
AU - Chen, Guanhua
AU - Telenti, Amalio
AU - Maher, M. Cyrus
AU - Bartha, Istvan
AU - Walker, Lorne
AU - Orwoll, Benjamin E.
AU - Mishra, Meenakshi
AU - Alamgir, Joy
AU - Cragin, Bruce L.
AU - Ferguson, Christopher H.
AU - Wong, Hui Hsing
AU - Deslattes Mays, Anne
AU - Misquitta, Leonie
AU - Demarco, Kerry A.
AU - Sciarretta, Kimberly L.
AU - Patel, Sandeep A.
N1 - Publisher Copyright:
© The Author(s), 2023. Published by Cambridge University Press on behalf of The Association for Clinical and Translational Science.
PY - 2023/7/10
Y1 - 2023/7/10
N2 - Introduction: With persistent incidence, incomplete vaccination rates, confounding respiratory illnesses, and few therapeutic interventions available, COVID-19 continues to be a burden on the pediatric population. During a surge, it is difficult for hospitals to direct limited healthcare resources effectively. While the overwhelming majority of pediatric infections are mild, there have been life-threatening exceptions that illuminated the need to proactively identify pediatric patients at risk of severe COVID-19 and other respiratory infectious diseases. However, a nationwide capability for developing validated computational tools to identify pediatric patients at risk using real-world data does not exist. Methods: HHS ASPR BARDA sought, through the power of competition in a challenge, to create computational models to address two clinically important questions using the National COVID Cohort Collaborative: (1) Of pediatric patients who test positive for COVID-19 in an outpatient setting, who are at risk for hospitalization? (2) Of pediatric patients who test positive for COVID-19 and are hospitalized, who are at risk for needing mechanical ventilation or cardiovascular interventions? Results: This challenge was the first, multi-agency, coordinated computational challenge carried out by the federal government as a response to a public health emergency. Fifty-five computational models were evaluated across both tasks and two winners and three honorable mentions were selected. Conclusion: This challenge serves as a framework for how the government, research communities, and large data repositories can be brought together to source solutions when resources are strapped during a pandemic.
AB - Introduction: With persistent incidence, incomplete vaccination rates, confounding respiratory illnesses, and few therapeutic interventions available, COVID-19 continues to be a burden on the pediatric population. During a surge, it is difficult for hospitals to direct limited healthcare resources effectively. While the overwhelming majority of pediatric infections are mild, there have been life-threatening exceptions that illuminated the need to proactively identify pediatric patients at risk of severe COVID-19 and other respiratory infectious diseases. However, a nationwide capability for developing validated computational tools to identify pediatric patients at risk using real-world data does not exist. Methods: HHS ASPR BARDA sought, through the power of competition in a challenge, to create computational models to address two clinically important questions using the National COVID Cohort Collaborative: (1) Of pediatric patients who test positive for COVID-19 in an outpatient setting, who are at risk for hospitalization? (2) Of pediatric patients who test positive for COVID-19 and are hospitalized, who are at risk for needing mechanical ventilation or cardiovascular interventions? Results: This challenge was the first, multi-agency, coordinated computational challenge carried out by the federal government as a response to a public health emergency. Fifty-five computational models were evaluated across both tasks and two winners and three honorable mentions were selected. Conclusion: This challenge serves as a framework for how the government, research communities, and large data repositories can be brought together to source solutions when resources are strapped during a pandemic.
KW - COVID-19
KW - Pediatrics
KW - community challenges
KW - evaluation
KW - machine learning
UR - http://www.scopus.com/inward/record.url?scp=85165317993&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85165317993&partnerID=8YFLogxK
U2 - 10.1017/cts.2023.549
DO - 10.1017/cts.2023.549
M3 - Article
AN - SCOPUS:85165317993
SN - 2059-8661
VL - 7
JO - Journal of Clinical and Translational Science
JF - Journal of Clinical and Translational Science
IS - 1
M1 - e175
ER -