Closing the data loop: An integrated open access analysis platform for the MIMIC database

Mohammad Adibuzzaman; Ken Musselman; Alistair Johnson; Paul Brown; Zachary Pitluk; Ananth Grama

doi:10.22489/cinc.2016.043-205

Closing the data loop: An integrated open access analysis platform for the MIMIC database

Mohammad Adibuzzaman, Ken Musselman, Alistair Johnson, Paul Brown, Zachary Pitluk, Ananth Grama

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

5 Scopus citations

Abstract

We describe a new model for collaborative access, exploration, and analyses of the Medical Information Mart for Intensive Care - III (MIMIC III) database for translational clinical research. The proposed model addresses the significant disconnect between data collection at the point of care and translational clinical research. It addresses problems of data integration, preprocessing, normalization, analyses (along with associated compute back-end), and visualization. The proposed platform is general, and can be easily adapted to other databases. The pre-packaged analyses toolkit is easily extensible, and allows for multi-language support. The platform can be easily federated, mirrored at other locations, and supports a RESTful API for service composition and scaling.

Original language	English (US)
Title of host publication	Computing in Cardiology Conference, CinC 2016
Editors	Alan Murray
Publisher	IEEE Computer Society
Pages	137-140
Number of pages	4
ISBN (Electronic)	9781509008964
DOIs	https://doi.org/10.22489/cinc.2016.043-205
State	Published - Mar 1 2016
Externally published	Yes
Event	43rd Computing in Cardiology Conference, CinC 2016 - Vancouver, Canada Duration: Sep 11 2016 → Sep 14 2016

Publication series

Name	Computing in Cardiology
Volume	43
ISSN (Print)	2325-8861
ISSN (Electronic)	2325-887X

Other

Other	43rd Computing in Cardiology Conference, CinC 2016
Country/Territory	Canada
City	Vancouver
Period	9/11/16 → 9/14/16

ASJC Scopus subject areas

General Computer Science
Cardiology and Cardiovascular Medicine

Access to Document

10.22489/cinc.2016.043-205

Cite this

Adibuzzaman, M., Musselman, K., Johnson, A., Brown, P., Pitluk, Z., & Grama, A. (2016). Closing the data loop: An integrated open access analysis platform for the MIMIC database. In A. Murray (Ed.), Computing in Cardiology Conference, CinC 2016 (pp. 137-140). Article 7868698 (Computing in Cardiology; Vol. 43). IEEE Computer Society. https://doi.org/10.22489/cinc.2016.043-205

Closing the data loop: An integrated open access analysis platform for the MIMIC database. / Adibuzzaman, Mohammad; Musselman, Ken; Johnson, Alistair et al.
Computing in Cardiology Conference, CinC 2016. ed. / Alan Murray. IEEE Computer Society, 2016. p. 137-140 7868698 (Computing in Cardiology; Vol. 43).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Adibuzzaman, M, Musselman, K, Johnson, A, Brown, P, Pitluk, Z & Grama, A 2016, Closing the data loop: An integrated open access analysis platform for the MIMIC database. in A Murray (ed.), Computing in Cardiology Conference, CinC 2016., 7868698, Computing in Cardiology, vol. 43, IEEE Computer Society, pp. 137-140, 43rd Computing in Cardiology Conference, CinC 2016, Vancouver, Canada, 9/11/16. https://doi.org/10.22489/cinc.2016.043-205

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Closing the data loop: An integrated open access analysis platform for the MIMIC database

Abstract

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