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Whole transcriptome sequencing reveals extensive unspliced mRNA in metastatic castration-resistant prostate cancer
Sowalsky, A. G., Xia, Z., Wang, L., Zhao, H., Chen, S., Bubley, G. J., Balk, S. P. & Li, W., Jan 1 2015, In: Molecular Cancer Research. 13, 1, p. 98-106 9 p.Research output: Contribution to journal › Article › peer-review
Open Access88 Scopus citations -
Whole transcriptome RNA-seq analysis of breast cancer recurrence risk using formalin-fixed paraffin-embedded tumor tissue
Sinicropi, D., Qu, K., Collin, F., Crager, M., Liu, M. L., Pelham, R. J., Pho, M., de Rossi, A., Jeong, J., Scott, A., Ambannavar, R., Zheng, C., Mena, R., Esteban, J., Stephans, J., Morlan, J. & Baker, J., Jul 13 2012, In: PloS one. 7, 7, e40092.Research output: Contribution to journal › Article › peer-review
Open Access63 Scopus citations -
Whole transcriptome analysis and validation of metabolic pathways in subcutaneous adipose tissues during FGF21-induced weight loss in non-human primates
Murray, S. A., Dalbøge, L. S., Baquero, K., Sanford, C. A., Misquith, A., Mercer, A. J., Meek, T. H., Guldbrandt, M., Andersen, B., Kievit, P., Grove, K. L. & Kutlu, B., Dec 1 2020, In: Scientific Reports. 10, 1, 7287.Research output: Contribution to journal › Article › peer-review
Open Access7 Scopus citations -
Whole Systems Within Whole Systems: The Oregon Health Plan's Expansion of Services for Back and Neck Pain
Eaves, E. R., Hsu, C. W., Debar, L. L., Livingston, C. J., Ocker, L. E., McDonald, S. J., Dillon-Sumner, L. & Ritenbaugh, C., Mar 2019, In: Journal of Alternative and Complementary Medicine. 25, S1, p. S61-S68Research output: Contribution to journal › Article › peer-review
Open Access10 Scopus citations -
Whole-pelvis, "mini-pelvis," or prostate-only external beam radiotherapy after neoadjuvant and concurrent hormonal therapy in patients treated in the Radiation Therapy Oncology Group 9413 trial
Roach, M., DeSilvio, M., Valicenti, R., Grignon, D., Asbell, S. O., Lawton, C., Thomas, C. R. & Shipley, W. U., Nov 1 2006, In: International Journal of Radiation Oncology Biology Physics. 66, 3, p. 647-653 7 p.Research output: Contribution to journal › Article › peer-review
167 Scopus citations -
Whole organ pancreas recovery using ultrasonically activated shears [1]
Hedges, J. C., Hovsepian, R. V., Shen, G. K. & Niles, P. A., Mar 27 2005, In: Transplantation. 79, 6, p. 735 1 p.Research output: Contribution to journal › Letter › peer-review
Open Access -
Whole mount in situ hybridization and immunohistochemistry for zebrafish larvae
Cunningham, R. L. & Monk, K. R., 2018, Methods in Molecular Biology. Humana Press Inc., p. 371-384 14 p. (Methods in Molecular Biology; vol. 1739).Research output: Chapter in Book/Report/Conference proceeding › Chapter
17 Scopus citations -
Whole health options and pain education (WHOPE): A pragmatic trial comparing whole health team vs primary care group education to promote nonpharmacological strategies to improve pain, functioning, and quality of life in veterans-rationale, methods, and implementation
Seal, K. H., Becker, W. C., Murphy, J. L., Purcell, N., Denneson, L. M., Morasco, B. J., Martin, A. M., Reddy, K., van Iseghem, T., Krebs, E. E., Painter, J. M., Hagedorn, H., Pyne, J. M., Hixon, J., Maguen, S., Neylan, T. C., Borsari, B., DeRonne, B., Gibson, C., Matthias, M. S., & 7 others , 2020, In: Pain Medicine (United States). 21, p. S91-S99Research output: Contribution to journal › Article › peer-review
Open Access15 Scopus citations -
Whole genome sequencing reveals novel IGHMBP2 variant leading to unique cryptic splice-site and Charcot-Marie-Tooth phenotype with early onset symptoms
Undiagnosed Diseases Network, Jun 2019, In: Molecular Genetics and Genomic Medicine. 7, 6, e00676.Research output: Contribution to journal › Article › peer-review
Open Access17 Scopus citations -
Whole genome sequencing predicts novel human disease models in rhesus macaques
Bimber, B. N., Ramakrishnan, R., Cervera-Juanes, R., Madhira, R., Peterson, S. M., Norgren, R. B. & Ferguson, B., Jul 2017, In: Genomics. 109, 3-4, p. 214-220 7 p.Research output: Contribution to journal › Article › peer-review
Open Access22 Scopus citations -
Whole-genome sequencing of individuals from a founder population identifies candidate genes for asthma
Campbell, C. D., Mohajeri, K., Malig, M., Hormozdiari, F., Nelson, B., Du, G., Patterson, K. M., Eng, C., Torgerson, D. G., Hu, D., Herman, C., Chong, J. X., Ko, A., O'Roak, B. J., Krumm, N., Vives, L., Lee, C., Roth, L. A., Rodriguez-Cintron, W., Rodriguez-Santana, J., & 13 others , Aug 12 2014, In: PloS one. 9, 8, e104396.Research output: Contribution to journal › Article › peer-review
Open Access28 Scopus citations -
Whole-genome sequencing in primary care
Vassy, J. L., Christensen, K. D., Schonman, E. F., Blout, C. L., Robinson, J. O., Krier, J. B., Diamond, P. M., Lebo, M., Machini, K., Azzariti, D. R., Dukhovny, D., Bates, D. W., MacRae, C. A., Murray, M. F., Rehm, H. L., McGuire, A. L. & Green, R. C., Aug 1 2017, In: Annals of internal medicine. 167, 3, p. I20Research output: Contribution to journal › Comment/debate › peer-review
Open Access -
Whole genome sequencing identifies novel genetic mutations in patients with eczema herpeticum
Bin, L., Malley, C., Taylor, P., Preethi Boorgula, M., Chavan, S., Daya, M., Mathias, M., Shankar, G., Rafaels, N., Vergara, C., Potee, J., Campbell, M., Hanifin, J. M., Simpson, E., Schneider, L. C., Gallo, R. L., Hata, T., Paller, A. S., De Benedetto, A., Beck, L. A., & 8 others , Aug 2021, In: Allergy: European Journal of Allergy and Clinical Immunology. 76, 8, p. 2510-2523 14 p.Research output: Contribution to journal › Article › peer-review
Open Access17 Scopus citations -
Whole-genome sequencing identifies EN1 as a determinant of bone density and fracture
Zheng, H. F., Forgetta, V., Hsu, Y. H., Estrada, K., Rosello-Diez, A., Leo, P. J., Dahia, C. L., Park-Min, K. H., Tobias, J. H., Kooperberg, C., Kleinman, A., Styrkarsdottir, U., Liu, C. T., Uggla, C., Evans, D. S., Nielson, C. M., Walter, K., Pettersson-Kymmer, U., McCarthy, S., Eriksson, J., & 136 others , Oct 1 2015, In: Nature. 526, 7571, p. 112-117 6 p.Research output: Contribution to journal › Article › peer-review
Open Access423 Scopus citations -
Whole-genome sequencing for optimized patient management
Bainbridge, M. N., Wiszniewski, W., Murdock, D. R., Friedman, J., Gonzaga-Jauregui, C., Newsham, I., Reid, J. G., Fink, J. K., Morgan, M. B., Gingras, M. C., Muzny, D. M., Hoang, L. D., Yousaf, S., Lupski, J. R. & Gibbs, R. A., Jun 15 2011, In: Science translational medicine. 3, 87, 87re3.Research output: Contribution to journal › Article › peer-review
Open Access240 Scopus citations -
Whole genome sequencing-based mapping and candidate identification of mutations from fixed zebrafish tissue
Sanchez, N. E., Harty, B. L., O'Reilly-Pol, T., Ackerman, S. D., Herbert, A. L., Holmgren, M., Johnson, S. L., Gray, R. S. & Monk, K. R., Oct 1 2017, In: G3: Genes, Genomes, Genetics. 7, 10, p. 3415-3425 11 p.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
Whole genome sequencing and a new bioinformatics platform allow for rapid gene identification in d. melanogaster EMS screens
Gonzalez, M. A., VanBooven, D., Hulme, W., Ulloa, R. H., Lebrigio, R. F. A., Osterloh, J., Logan, M., Freeman, M. & Zuchner, S., Dec 5 2012, In: Biology. 1, 3, p. 766-777 12 p.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Whole-genome sequence and assembly of the Javan gibbon (Hylobates moloch)
Escalona, M., Vancampen, J., Maurer, N. W., Haukness, M., Okhovat, M., Harris, R. S., Watwood, A., Hartley, G. A., O'neill, R. J., Medvedev, P., Makova, K. D., Vollmers, C., Carbone, L. & Green, R. E., Jan 1 2023, In: Journal of Heredity. 114, 1, p. 35-43 9 p.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
Whole-genome characterization of lung adenocarcinomas lacking the RTK/RAS/RAF pathway
TCGA Research Network, Feb 2 2021, In: Cell Reports. 34, 5, 108707.Research output: Contribution to journal › Article › peer-review
Open Access13 Scopus citations -
Whole-genome characterization of human and simian immunodeficiency virus intrahost diversity by ultradeep pyrosequencing
Bimber, B. N., Dudley, D. M., Lauck, M., Becker, E. A., Chin, E. N., Lank, S. M., Grunenwald, H. L., Caruccio, N. C., Maffitt, M., Wilson, N. A., Reed, J. S., Sosman, J. M., Tarosso, L. F., Sanabani, S., Kallas, E. G., Hughes, A. L. & O'Connor, D. H., Nov 2010, In: Journal of virology. 84, 22, p. 12087-12092 6 p.Research output: Contribution to journal › Article › peer-review
Open Access57 Scopus citations -
Whole-genome characterization in pedigreed non-human primates using genotyping-by-sequencing (GBS) and imputation
Bimber, B. N., Raboin, M. J., Letaw, J., Nevonen, K. A., Spindel, J. E., McCouch, S. R., Cervera-Juanes, R., Spindel, E., Carbone, L., Ferguson, B. & Vinson, A., 2016, In: BMC Genomics. 17, 1, 676.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Whole-genome and transcriptional analysis of treatment-emergent small-cell neuroendocrine prostate cancer demonstrates intraclass heterogeneity
Aggarwal, R. R., Quigley, D. A., Huang, J., Zhang, L., Beer, T. M., Rettig, M. B., Reiter, R. E., Gleave, M. E., Thomas, G. V., Foye, A., Playdle, D., Lloyd, P., Chi, K. N., Evans, C. P., Lara, P. N., Feng, F. Y., Alumkal, J. J. & Small, E. J., Jun 1 2019, In: Molecular Cancer Research. 17, 6, p. 1235-1240 6 p.Research output: Contribution to journal › Article › peer-review
Open Access46 Scopus citations -
Whole genome analysis of genetic alterations in small DNA samples using hyperbranched strand displacement amplification and array-CGH
Lage, J. M., Leamon, J. H., Pejovic, T., Hamann, S., Lacey, M., Dillon, D., Segraves, R., Vossbrinck, B., González, A., Pinkel, D., Albertson, D. G., Costa, J. & Lizardi, P. M., Feb 1 2003, In: Genome Research. 13, 2, p. 294-307 14 p.Research output: Contribution to journal › Article › peer-review
Open Access219 Scopus citations -
Whole-genome analyses resolve early branches in the tree of life of modern birds
Jarvis, E. D., Mirarab, S., Aberer, A. J., Li, B., Houde, P., Li, C., Ho, S. Y. W., Faircloth, B. C., Nabholz, B., Howard, J. T., Suh, A., Weber, C. C., Da Fonseca, R. R., Li, J., Zhang, F., Li, H., Zhou, L., Narula, N., Liu, L., Ganapathy, G., & 85 others , Dec 12 2014, In: Science. 346, 6215, p. 1320-1331 12 p.Research output: Contribution to journal › Article › peer-review
Open Access1295 Scopus citations -
Whole-food sources of vitamin A more effectively inhibit female rat sexual maturation, mammary gland development, and mammary carcinogenesis than retinyl palmitate
McDaniel, S. M., O'Neill, C., Metz, R. P., Tarbutton, E., Stacewicz-Sapuntzakis, M., Heimendinger, J., Wolfe, P., Thompson, H. & Schedin, P., Jun 2007, In: Journal of Nutrition. 137, 6, p. 1415-1422 8 p.Research output: Contribution to journal › Article › peer-review
Open Access8 Scopus citations -
Whole exome sequencing identifies three novel mutations in ANTXR1 in families with GAPO syndrome
Bayram, Y., Pehlivan, D., Karaca, E., Gambin, T., Jhangiani, S. N., Erdin, S., Gonzaga-Jauregui, C., Wiszniewski, W., Muzny, D., Elcioglu, N. H., Yildirim, M. S., Bozkurt, B., Zamani, A. G., Boerwinkle, E., Gibbs, R. A. & Lupski, J. R., Sep 2014, In: American Journal of Medical Genetics, Part A. 164, 9, p. 2328-2334 7 p.Research output: Contribution to journal › Article › peer-review
Open Access21 Scopus citations -
Whole exome sequencing identifies de novo mutations in GATA6 associated with congenital diaphragmatic hernia
Yu, L., Bennett, J. T., Wynn, J., Carvill, G. L., Cheung, Y. H., Shen, Y., Mychaliska, G. B., Azarow, K. S., Crombleholme, T. M., Chung, D. H., Potoka, D., Warner, B. W., Bucher, B., Lim, F. Y., Pietsch, J., Stolar, C., Aspelund, G., Arkovitz, M. S., Mefford, H. & Chung, W. K., 2014, In: Journal of medical genetics. 51, 3, p. 197-202 6 p.Research output: Contribution to journal › Article › peer-review
Open Access46 Scopus citations -
Whole-exome sequencing identifies a recurrent NAB2-STAT6 fusion in solitary fibrous tumors
Chmielecki, J., Crago, A. M., Rosenberg, M., O'Connor, R., Walker, S. R., Ambrogio, L., Auclair, D., McKenna, A., Heinrich, M. C., Frank, D. A. & Meyerson, M., Feb 2013, In: Nature genetics. 45, 2, p. 131-132 2 p.Research output: Contribution to journal › Article › peer-review
Open Access454 Scopus citations -
Whole-exome sequencing combined with functional genomics reveals novel candidate driver cancer genes in endometrial cancer
Liang, H., Cheung, L. W. T., Li, J., Ju, Z., Yu, S., Stemke-Hale, K., Dogruluk, T., Lu, Y., Liu, X., Gu, C., Guo, W., Scherer, S. E., Carter, H., Westin, S. N., Dyer, M. D., Verhaak, R. G. W., Zhang, F., Karchin, R., Liu, C. G., Lu, K. H., & 4 others , Nov 2012, In: Genome Research. 22, 11, p. 2120-2129 10 p.Research output: Contribution to journal › Article › peer-review
Open Access202 Scopus citations -
Whole-column radioactivity detection: Simultaneous separation and enhanced detectability
Link, J. M. & Synovec, R. E., Jul 15 1999, In: Analytical Chemistry. 71, 14, p. 2700-2707 8 p.Research output: Contribution to journal › Article › peer-review
9 Scopus citations -
Whole-chromosome arm acquired uniparental disomy in cancer development is a consequence of isochromosome formation
Tuna, M., Amos, C. I. & Mills, G. B., Mar 2022, In: Neoplasia (United States). 25, p. 9-17 9 p.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
Whole-body radiation dosimetry of 2-[18F]Fluoro-A-85380 in human PET imaging studies
Obrzut, S. L., Koren, A. O., Mandelkern, M. A., Brody, A. L., Hoh, C. K. & London, E. D., Nov 2005, In: Nuclear Medicine and Biology. 32, 8, p. 869-874 6 p.Research output: Contribution to journal › Article › peer-review
Open Access16 Scopus citations -
Whole-body proton irradiation causes long-term damage to hematopoietic stem cells in mice
Chang, J., Feng, W., Wang, Y., Luo, Y., Allen, A. R., Koturbash, I., Turner, J., Stewart, B., Raber, J., Hauer-Jensen, M., Zhou, D. & Shao, L., Feb 1 2015, In: Radiation research. 183, 2, p. 240-248 9 p.Research output: Contribution to journal › Article › peer-review
Open Access47 Scopus citations -
Whole body nitrogen kinetics and their relationship to growth in short children treated with recombinant human growth hormone
Dempsher, D. P., Bier, D. M., Tollefsen, S. E., Rotwein, P. S., Daughaday, W. H., Jensen, M. C., Galgani, J. P., Heath-Monnig, E. & Trivedi, B., Oct 1990, In: Pediatric Research. 28, 4, p. 394-400 7 p.Research output: Contribution to journal › Article › peer-review
Open Access14 Scopus citations -
Whole-body MR angiography: Initial experience in imaging pediatric vasculopathy
Hong, T. S., Greer, M. L. C., Grosse-Wortmann, L., Yoo, S. J. & Babyn, P. S., Jun 2011, In: Pediatric Radiology. 41, 6, p. 769-778 10 p.Research output: Contribution to journal › Article › peer-review
8 Scopus citations -
Whole-body imaging of cell death provides a systemic, minimally invasive, dynamic, and near-real time indicator for chemotherapeutic drug toxicity
Johnson, S. E., Ugolkov, A., Haney, C. R., Bondarenko, G., Li, L., Waters, E. A., Bergan, R., Tran, A., O'Halloran, T. V., Mazar, A. & Zhao, M., Feb 15 2019, In: Clinical Cancer Research. 25, 4, p. 1331-1342 12 p.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Whole body imaging in blunt multisystem trauma patients without obvious signs of injury: Results of a prospective study
Salim, A., Sangthong, B., Martin, M., Brown, C., Plurad, D., Demetriades, D., Tyburski, J. G., Hughes, T., Marshall, J. S., Brasel, K. J., Jamison, R. L. & Grube, B. J., May 2006, In: Archives of Surgery. 141, 5, p. 468-475 8 p.Research output: Contribution to journal › Article › peer-review
296 Scopus citations -
Whole-body FDG PET-MR oncologic imaging: pitfalls in clinical interpretation related to inaccurate MR-based attenuation correction
Attenberger, U., Catana, C., Chandarana, H., Catalano, O. A., Friedman, K., Schonberg, S. A., Thrall, J., Salvatore, M., Rosen, B. R. & Guimaraes, A. R., Aug 12 2015, In: Abdominal Imaging. 40, 6, p. 1374-1386 13 p.Research output: Contribution to journal › Review article › peer-review
26 Scopus citations -
Whole blood ω-3 fatty acids are inversely associated with carotid intima-media thickness in indigenous mexican women
Monge, A., Harris, W. S., Ortiz-Panozo, E., Yunes, E., Cantu-Brito, C., Catzin-Kuhlmann, A., López-Ridaura, R. & Lajous, M., 2016, In: Journal of Nutrition. 146, 7, p. 1365-1372 8 p.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Whole Blood Resuscitation and Association with Survival in Injured Patients with an Elevated Probability of Mortality
Shock, Whole Blood, and Assessment of Traumatic Brain Injury (SWAT) Study Group, Aug 1 2023, In: Journal of the American College of Surgeons. 237, 2, p. 206-219 14 p.Research output: Contribution to journal › Article › peer-review
Open Access14 Scopus citations -
Whole blood n-3 fatty acids are associated with executive function in 2–6-year-old Northern Ghanaian children
Adjepong, M., Yakah, W., Harris, W. S., Annan, R. A., Pontifex, M. B. & Fenton, J. I., Jul 2018, In: Journal of Nutritional Biochemistry. 57, p. 287-293 7 p.Research output: Contribution to journal › Article › peer-review
16 Scopus citations -
Whole blood levels of the n-6 essential fatty acid linoleic acid are inversely associated with stunting in 2-to-6 year old Tanzanian children: A cross-sectional study
Jumbe, T., Comstock, S. S., Hahn, S. L., Harris, W. S., Kinabo, J. & Fenton, J. I., May 1 2016, In: PloS one. 11, 5, e0154715.Research output: Contribution to journal › Article › peer-review
Open Access20 Scopus citations -
Whole-blood interleukin-18 level during early HIV-1 infection is associated with reduced CXCR4 coreceptor expression and interferon-γ levels
Sailer, C. A., Pott, G. B., Dinarello, C. A., Whinney, S. M., Forster, J. E., Larson-Duran, J. K., Landay, A., Al-Harthi, L., Schooley, R. T., Benson, C. A., Judson, F. N., Thompson, M., Palella, F. J. & Shapiro, L., Mar 1 2007, In: Journal of Infectious Diseases. 195, 5, p. 734-738 5 p.Research output: Contribution to journal › Article › peer-review
Open Access15 Scopus citations -
Whole blood interferon-gamma responses to Mycobacterium tuberculosis antigens in young household contacts of persons with tuberculosis in Uganda
Lewinsohn, D. A., Zalwango, S., Stein, C. M., Mayanja-Kizza, H., Okwera, A., Boom, W. H., Mugerwa, R. D. & Whalen, C. C., Oct 15 2008, In: PloS one. 3, 10, e3407.Research output: Contribution to journal › Article › peer-review
Open Access40 Scopus citations -
Whole-blood fatty acids are associated with executive function in Tanzanian children aged 4-6 years: A cross-sectional study
Jumbe, T., Comstock, S. S., Harris, W. S., Kinabo, J., Pontifex, M. B. & Fenton, J. I., Nov 14 2016, In: British Journal of Nutrition. 116, 9, p. 1537-1545 9 p.Research output: Contribution to journal › Article › peer-review
Open Access13 Scopus citations -
Whole blood assay for trypsin activity using polyanionic focusing gel electrophoresis
Lefkowitz, R. B., Schmid-Schönbein, G. W. & Heller, M. J., Jul 2010, In: ELECTROPHORESIS. 31, 14, p. 2442-2451 10 p.Research output: Contribution to journal › Article › peer-review
32 Scopus citations -
Whole blood assay for elastase, chymotrypsin, matrix metalloproteinase-2, and matrix metalloproteinase-9 activity
Lefkowitz, R. B., Schmid-Schönbein, G. W. & Heller, M. J., Oct 1 2010, In: Analytical Chemistry. 82, 19, p. 8251-8258 8 p.Research output: Contribution to journal › Article › peer-review
27 Scopus citations -
Whole-animal chemical screen identifies colistin as a new immunomodulator that targets conserved pathways
Cai, Y., Cao, X. & Aballay, A., Aug 12 2014, In: mBio. 5, 4, e01235-14.Research output: Contribution to journal › Article › peer-review
Open Access31 Scopus citations -
Who is the radiation therapist?
Stevens, K. R., Jul 1989, In: International Journal of Radiation Oncology, Biology, Physics. 17, 1, p. 243 1 p.Research output: Contribution to journal › Letter › peer-review
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Who is the better donor for older hematopoietic transplant recipients: An older-aged sibling or a young, matched unrelated volunteer?
Alousi, A. M., Le-Rademacher, J., Saliba, R. M., Appelbaum, F. R., Artz, A., Benjamin, J., Devine, S. M., Kan, F., Laughlin, M. J., Lazarus, H. M., Liesveld, J., Perales, M. A., Maziarz, R. T., Sabloff, M., Waller, E. K., Eapen, M. & Champlin, R. E., 2013, In: Blood. 121, 13, p. 2567-2573 7 p.Research output: Contribution to journal › Article › peer-review
Open Access103 Scopus citations