Oregon Health and Sciences University

Research output

Research output per year 1950 2010 2011 2012 2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 2024

• 46191 Article
• 6349 Review article
• 2396 Comment/debate
• 2074 Letter
• 6203 More
  • 2003 Chapter
  • 1569 Editorial
  • 1541 Short survey
  • 695 Conference contribution
  • 205 Conference article
  • 68 Paper
  • 66 Book
  • 56 Foreword/postscript

Research output per year

Research output per year

Search results

• 2023

  140° Field of View Contact Handheld Swept-source OCT for Pediatric Peripheral Imaging

  Ni, S., Nguyen, T. T. P., Ng, R., Ostmo, S., Jia, Y., Chiang, M. F., Huang, D., Skalet, A. H., Campbell, J. P. & Jian, Y., 2023, Ophthalmic Technologies XXXIII. Hammer, D. X., Bizheva, K. & Schuele, G. (eds.). SPIE, 123600G. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12360).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Pediatrics 100%
  • Retinal 84%
  • field of view 68%
  • Retina 64%
  • prototypes 58%

• Automated Anatomical Feature Detection for Completeness of Abdominal FAST Exam

  Lee, H. W., Zahiri, M., Ghoshal, G., Schmidt, S., Schnittke, N., Hicks, B., Kaili, M., Gregory, C., Feuerherdt, M., Thomas, C., Zhang, Y., Hibbs, K., Sreenivasan, A., Shupp, J. W., Rizzo, J., Gregory, K. & Raju, B., 2023, IUS 2023 - IEEE International Ultrasonics Symposium, Proceedings. IEEE Computer Society, (IEEE International Ultrasonics Symposium, IUS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • completeness 100%
  • organs 89%
  • quadrants 42%
  • hemorrhages 26%
  • classifying 19%

• Comparison of video capture cards for streaming real-time procedural imaging onto mixed reality headset

  Shah, S. & Park, B., 2023, Medical Imaging 2023: Imaging Informatics for Healthcare, Research, and Applications. Park, B. J. & Yoshida, H. (eds.). SPIE, 124690J. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12469).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Augmented Reality 100%
  • earphones 98%
  • Mixed reality 87%
  • cards 79%
  • Imaging techniques 51%

• Contrastive Self-Supervised Learning for Spatio-Temporal Analysis of Lung Ultrasound Videos

  Chen, L., Rubin, J., Ouyang, J., Balaraju, N., Patil, S., Mehanian, C., Kulhare, S., Millin, R., Gregory, K. W., Gregory, C. R., Zhu, M., Kessler, D. O., Malia, L., Dessie, A., Rabiner, J., Coneybeare, D., Shopsin, B., Hersh, A., Madar, C., Shupp, J., & 7 othersJohnson, L. S., Avila, J., Dwyer, K., Weimersheimer, P., Raju, B., Kruecker, J. & Chen, A., 2023, 2023 IEEE International Symposium on Biomedical Imaging, ISBI 2023. IEEE Computer Society, (Proceedings - International Symposium on Biomedical Imaging; vol. 2023-April).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Spatio-Temporal Analysis 100%
  • Supervised learning 73%
  • Ultrasonics 58%
  • Learning 50%
  • Consolidation 47%
  1 Scopus citations

• First demonstration of a novel nerve-targeting fluorophore in a cohort of ex vivo human tissues

  Hebert, K. A., Bateman, L., Parker, D., Nunziata, J., Paydarfar, J. A., Hong, J., Kerr, D. A., Zanazzi, G. J., Barth, C. W., Wang, L., Gibbs, S. L. & Henderson, E. R., 2023, Molecular-Guided Surgery: Molecules, Devices, and Applications IX. Gioux, S., Gibbs, S. L. & Pogue, B. W. (eds.). SPIE, 123610D. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12361).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Fluorophores 100%
  • Route of Application 88%
  • nerves 67%
  • Tissue 50%
  • Demonstrations 48%

• Image processing approach provides robust feature extraction for classification with small sample sizes

  Zhakubayev, A., Andersen, T., Vesterby, A., Boel, L. W. T., Grant, K., Iwaniec, U., Turner, R., Baker, E. & Benton, M. L., May 10 2023, ICISDM 2023 - 7th International Conference on Information System and Data Mining. Association for Computing Machinery, p. 82-89 8 p. (ACM International Conference Proceeding Series).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Alcohols 90%
  • Image processing 80%
  • Feature extraction 79%
  • Tomography 19%
  • Imaging techniques 15%

• Investigating the Impact of Temporal Labeling of Emergency Department Visits for COVID-19: Comparing Healthcare Disparities Analyses Using Comprehensive, Single-Site Data with National COVID Cohort Collaborative (N3C) Data

  Jones, M., Winger, A., Wernz, C., Michel, J., Jiang, S., Zhou, A., Hilton, E. J., Zemmel, M., Sengupta, S., Barnes, K., Loomba, J., Brown, D. E., Wilcox, A. B., Lee, A. M., Graves, A., Anzalone, A., Manna, A., Saha, A., Olex, A., Williams, A. E., & 116 othersSoutherland, A., Girvin, A. T., Walden, A., Sharathkumar, A. A., Amor, B., Bates, B., Hendricks, B., Patel, B., Alexander, C., Bramante, C., Ward-Caviness, C., Madlock-Brown, C., Suver, C., Chute, C., Dillon, C., Wu, C., Schmitt, C., Takemoto, C., Housman, D., Gabriel, D., Eichmann, D. A., Mazzotti, D., Boudreau, E., Hill, E., Zampino, E., Marti, E. C., Pfaff, E. R., French, E., Koraishy, F. M., Mariona, F., Prior, F., Sokos, G., Martin, G., Lehmann, H., Spratt, H., Mehta, H., Liu, H., Sidky, H., Awori Hayanga, J. W., Pincavitch, J., Clark, J., Richard Harper, J., Islam, J., Ge, J., Gagnier, J., Saltz, J. H., Buse, J., Mathew, J., Rutter, J. L., McMurry, J. A., Guinney, J., Starren, J., Crowley, K., Bradwell, K. R., Walters, K. M., Wilkins, K., Gersing, K. R., Cato, K. D., Murray, K., Kostka, K., Northington, L., Pyles, L. A., Misquitta, L., Cottrell, L., Portilla, L., Deacy, M., Bissell, M. M., Clark, M., Emmett, M., Saltz, M. M., Palchuk, M. B., Haendel, M. A., Adams, M., Temple-O'Connor, M., Kurilla, M. G., Morris, M., Qureshi, N., Safdar, N., Garbarini, N., Sharafeldin, N., Sadan, O., Francis, P. A., Burgoon, P. W., Robinson, P., Payne, P. R. O., Fuentes, R., Jawa, R., Erwin-Cohen, R., Patel, R., Moffitt, R. A., Zhu, R. L., Kamaleswaran, R., Hurley, R., Miller, R. T., Pyarajan, S., Michael, S. G., Bozzette, S., Mallipattu, S., Vedula, S., Chapman, S., O'Neil, S. T., Setoguchi, S., Hong, S. S., Johnson, S., Bennett, T. D., Callahan, T., Topaloglu, U., Sheikh, U., Gordon, V., Subbian, V., Kibbe, W. A., Hernandez, W., Beasley, W., Cooper, W., Hillegass, W. & Zhang, X. T., 2023, 2023 Systems and Information Engineering Design Symposium, SIEDS 2023. Institute of Electrical and Electronics Engineers Inc., p. 297-302 6 p. (2023 Systems and Information Engineering Design Symposium, SIEDS 2023).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Emergency Department 100%
  • Cohort 82%
  • Labeling 80%
  • Inpatients 56%
  • Healthcare 50%

• Melanin migration in retinitis pigmentosa evaluated by ultra-wide-field polarization diversity optical coherence tomography

  Miao, Y., Ni, S., Song, J., Jian, Y. & Ju, M. J., 2023, Optical Coherence Imaging Techniques and Imaging in Scattering Media V. Vakoc, B. J., Wojtkowski, M. & Yasuno, Y. (eds.). SPIE, 1263206. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 12632).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Optical Coherence Tomography 100%
  • Melanin 87%
  • Wide-field 81%
  • melanin 72%
  • Optical tomography 70%

• Mixed Orthographic/Phonemic Language Modeling: Beyond Orthographically Restricted Transformers (BORT)

  Gale, R. C., Salem, A. C., Fergadiotis, G. & Bedrick, S., 2023, ACL 2023 - 8th Workshop on Representation Learning for NLP, RepL4NLP 2023 - Proceedings of the Workshop. Can, B., Mozes, M., Cahyawijaya, S., Saphra, N., Kassner, N., Ravfogel, S., Ravichander, A., Zhao, C., Augenstein, I., Rogers, A., Cho, K., Grefenstette, E. & Voita, L. (eds.). Association for Computational Linguistics (ACL), p. 212-225 14 p. (Proceedings of the Annual Meeting of the Association for Computational Linguistics).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Language Model 100%
  • Language Modeling 97%
  • Phonemics 86%
  • Orthographic 81%
  • International Phonetic Alphabet 49%

• Proceduralist Criteria for Evaluating Interface Utility of Novel Imaging Modalities in Early Phase Clinical Trials - Evaluating the Need for Standardized Criteria

  Henderson, E. R., Elliott, J., Jiang, S., Gitajn, I. L., Lee, J., Gibbs, S., Bouvet, M., Mahadevan-Jansen, A., Daly, M., Streeter, S. S., Paulsen, K. D., Pogue, B. W., Samkoe, K. S. & Singhal, S., 2023, Molecular-Guided Surgery: Molecules, Devices, and Applications IX. Gioux, S., Gibbs, S. L. & Pogue, B. W. (eds.). SPIE, 123610F. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12361).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Medical imaging 100%
  • Fluorophores 98%
  • drugs 88%
  • Dose 67%
  • decision making 58%

• Real-time Line-Field OCT using low-cost high-speed camera

  Neuhaus, K., Ni, S., Khan, S., Tharawe, O., Chen, S., Huang, D. & Jian, Y., 2023, Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XXVII. Izatt, J. A. & Fujimoto, J. G. (eds.). SPIE, 123670F. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12367).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • high speed cameras 100%
  • High speed cameras 98%
  • Optical tomography 89%
  • Optical Coherence Tomography 88%
  • cameras 68%
  1 Scopus citations

• Ultra-widefield High-resolution OCT angiography of Rodent Retina

  Jia, Y., 2023, Optical Coherence Imaging Techniques and Imaging in Scattering Media V. Vakoc, B. J., Wojtkowski, M. & Yasuno, Y. (eds.). SPIE, 126321I. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 12632).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Optical Coherence Tomography 100%
  • Angiography 88%
  • Wide-field 81%
  • Retina 76%
  • rodents 72%

• Use of Freshly Amputated Human Limbs for Pre-Clinical Evaluation of Molecular-Targeted Fluorescent Probes

  Bateman, L. M., Hebert, K. A., Streeter, S. S., Nunziata, J. A., Barth, C. W., Wang, L. G., Gibbs, S. L. & Henderson, E. R., 2023, Molecular-Guided Surgery: Molecules, Devices, and Applications IX. Gioux, S., Gibbs, S. L. & Pogue, B. W. (eds.). SPIE, 1236109. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12361).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Fluorophores 100%
  • limbs 70%
  • Fluorescent Dyes 62%
  • Pump 57%
  • Fluorescent Probe 55%

• Visible-light optical coherence microscopy

  Huang, D., Khan, S., Neuhaus, K., Thaware, O., Karimi, A., Kelley, M., Redd, T., Acott, T. & Jian, Y., 2023, Optical Coherence Imaging Techniques and Imaging in Scattering Media V. Vakoc, B. J., Wojtkowski, M. & Yasuno, Y. (eds.). SPIE, 126320Q. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 12632).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Microscopy 100%
  • Imaging 75%
  • Microscopic examination 73%
  • canals 57%
  • Field of View 55%

• Visible-light optical coherence microscopy for corneal imaging

  Khan, S., Neuhaus, K., Thaware, O., Aga, M., Karimi, A., Kelley, M., Redd, T., Acott, T., Jin, M., Huang, D. & Jian, Y., 2023, Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XXVII. Izatt, J. A. & Fujimoto, J. G. (eds.). SPIE, 123670K. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12367).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Microscopic examination 100%
  • Collagen 88%
  • Optical tomography 84%
  • Microscopy 77%
  • Imaging techniques 70%
  1 Scopus citations

• Weakly Semi-supervised Detection in Lung Ultrasound Videos

  Ouyang, J., Chen, L., Li, G. Y., Balaraju, N., Patil, S., Mehanian, C., Kulhare, S., Millin, R., Gregory, K. W., Gregory, C. R., Zhu, M., Kessler, D. O., Malia, L., Dessie, A., Rabiner, J., Coneybeare, D., Shopsin, B., Hersh, A., Madar, C., Shupp, J., & 7 othersJohnson, L. S., Avila, J., Dwyer, K., Weimersheimer, P., Raju, B., Kruecker, J. & Chen, A., 2023, Information Processing in Medical Imaging - 28th International Conference, IPMI 2023, Proceedings. Frangi, A., de Bruijne, M., Wassermann, D. & Navab, N. (eds.). Springer Science and Business Media Deutschland GmbH, p. 195-207 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13939 LNCS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Object Detection 100%
  • Ultrasound 82%
  • Annotation 79%
  • Knowledge Transfer 51%
  • Ultrasonics 48%
  2 Scopus citations

• Weakly Semi-supervised Detector-based Video Classification with Temporal Context for Lung Ultrasound

  Li, G. Y., Chen, L., Zahiri, M., Balaraju, N., Patil, S., Mehanian, C., Gregory, C., Gregory, K., Raju, B., Kruecker, J. & Chen, A., 2023, Proceedings - 2023 IEEE/CVF International Conference on Computer Vision Workshops, ICCVW 2023. Institute of Electrical and Electronics Engineers Inc., p. 2475-2484 10 p. (Proceedings - 2023 IEEE/CVF International Conference on Computer Vision Workshops, ICCVW 2023).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
• 2022

  A MINIMALLY SUPERVISED APPROACH FOR MEDICAL IMAGE QUALITY ASSESSMENT IN DOMAIN SHIFT SETTINGS

  Yang, H., Coyner, A. S., Guretno, F., Mien, I. H., Foo, C. S., Campbell, J. P., Ostmo, S., Chiang, M. F. & Krishnaswamy, P., 2022, 2022 IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2022 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 1286-1290 5 p. (ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings; vol. 2022-May).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Image quality 100%
  • Ophthalmology 27%
  • Anomaly detection 18%
  • Screening 16%
  • Labels 15%
  1 Scopus citations

• An investigation into the in vivo performance of Changsha and rhodamine fluorophores

  Montaño, A. R., Wang, L. G., Masillati, A., Shams, N. A. & Gibbs, S. L., 2022, Molecular-Guided Surgery: Molecules, Devices, and Applications VIII. Gioux, S., Gibbs, S. L. & Pogue, B. W. (eds.). SPIE, 119430A. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11943).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Fluorophores 100%
  • Indocyanine Green 85%
  • Rhodamines 82%
  • rhodamine 70%
  • nerves 67%

• Arbitrary-Length Analogs to de Bruijn Sequences

  Nellore, A. & Ward, R., Jun 1 2022, 33rd Annual Symposium on Combinatorial Pattern Matching, CPM 2022. Bannai, H. & Holub, J. (eds.). Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 9. (Leibniz International Proceedings in Informatics, LIPIcs; vol. 223).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Competencies and Curricula Across the Spectrum of Learners for Biomedical and Health Informatics

  Hersh, W., Oct 26 2022, Achievements, Milestones and Challenges in Biomedical and Health Informatics. Mantas, J., Hasman, A. & Haux, R. (eds.). IOS Press BV, p. 93-107 15 p. (Studies in Health Technology and Informatics; vol. 300).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Medical informatics 100%
  • Medical Informatics 91%
  • Bioinformatics 78%
  • Curricula 75%
  • Curriculum 71%
  1 Scopus citations

• Control Matters in Elder Care Technology: Evidence and Direction for Designing It In

  Berridge, C., Zhou, Y., Lazar, A., Porwal, A., Mattek, N., Gothard, S. & Kaye, J., Jun 13 2022, DIS 2022 - Proceedings of the 2022 ACM Designing Interactive Systems Conference: Digital Wellbeing. Association for Computing Machinery, Inc, p. 1831-1848 18 p. (DIS 2022 - Proceedings of the 2022 ACM Designing Interactive Systems Conference: Digital Wellbeing).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Data storage equipment 100%
  • Monitoring 92%
  9 Scopus citations

• EFFICIENT FINE-TUNING OF DEEP NEURAL NETWORKS WITH EFFECTIVE PARAMETER ALLOCATION

  Wallis, P. & Song, X., 2022, 2022 IEEE International Conference on Image Processing, ICIP 2022 - Proceedings. IEEE Computer Society, p. 3510-3514 5 p. (Proceedings - International Conference on Image Processing, ICIP).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Deep neural networks 100%
  • Tuning 80%
  • Image classification 27%
  • Deep learning 23%
  • Computer vision 21%

• Fine-tuning physicochemical properties of Oxazine-4 for nerve-specific imaging

  Greer, W. S., Montaño, A., Shams, N. A., Szafran-Reeder, D., Masillati, A., Wang, L. G. & Gibbs, S. L., 2022, Molecular-Guided Surgery: Molecules, Devices, and Applications VIII. Gioux, S., Gibbs, S. L. & Pogue, B. W. (eds.). SPIE, 1194308. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11943).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Oxazines 100%
  • Fluorophores 89%
  • Physicochemical properties 69%
  • Optical properties 66%
  • Scaffolds 63%

• Image-based mapping of cells onto a cell cycle continuum for integration of single cell sequencing and live cell imaging

  Schultz, A., Alahmari, S., Johnson, J., Veith, T., Siddiqui, Z., El Naqa, I., Heiser, L. & Andor, N., 2022, Proceedings - IEEE 8th International Conference on Big Data Computing Service and Applications, BigDataService 2022. Institute of Electrical and Electronics Engineers Inc., p. 119-123 5 p. (Proceedings - IEEE 8th International Conference on Big Data Computing Service and Applications, BigDataService 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Imaging 100%
  • Sequencing 92%
  • Cells 81%
  • Imaging techniques 63%
  • Prior Information 51%

• Label Alignment Improves EEG-based Machine Learning-based Classification of Traumatic Brain Injury

  Vishwanath, M., Dutt, N., Rahmani, A. M., Lim, M. M. & Cao, H., 2022, 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2022. Institute of Electrical and Electronics Engineers Inc., p. 3546-3549 4 p. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS; vol. 2022-July).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Machine Learning 100%
  • Traumatic Brain Injury 87%
  • Electroencephalography 84%
  • Labels 74%
  • Brain 72%

• Medical Scribes Have a Variable Impact on Documentation Workflows

  Rule, A., Chiang, M. & Hribar, M. R., Jun 6 2022, MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation - Proceedings of the 18th World Congress on Medical and Health Informatics. Otero, P., Scott, P., Martin, S. Z. & Huesing, E. (eds.). IOS Press BV, p. 892-896 5 p. (Studies in Health Technology and Informatics; vol. 290).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Workflow 100%
  • Documentation 85%
  • Ophthalmology 69%
  • Health 66%
  • Physicians 57%

• Nonlinear unmixing to account for blood absorption in multispectral imaging for improved quantification of intracellular and extracellular EGFR

  Torres, V. C., Wang, L., Hodge, S., Solanki, A., McMahon, N. P., Gibbs, S. L., Tichauer, K. M. & Samkoe, K. S., 2022, Visualizing and Quantifying Drug Distribution in Tissue VI. Chan, K. F. & Evans, C. L. (eds.). SPIE, 1193805. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11938).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Epidermal Growth Factor 100%
  • blood 55%
  • ErbB Receptors 55%
  • Blood 53%
  • Imaging techniques 44%

• Opportunistic Hip Fracture Risk Prediction in Men from X-ray: Findings from the Osteoporosis in Men (MrOS) Study

  Schmarje, L., Reinhold, S., Damm, T., Orwoll, E., Glüer, C. C. & Koch, R., 2022, Predictive Intelligence in Medicine - 5th International Workshop, PRIME 2022, Held in Conjunction with MICCAI 2022, Proceedings. Rekik, I., Adeli, E., Park, S. H. & Cintas, C. (eds.). Springer Science and Business Media Deutschland GmbH, p. 103-114 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13564 LNCS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Osteoporosis 100%
  • Half line 85%
  • Prediction 75%
  • X rays 64%
  • Computed Tomography 50%
  1 Scopus citations

• Optimal drug treatment for reducing long-term drug resistance

  Asnaashari, T. G. & Chang, Y. H., 2022, 2022 IEEE 61st Conference on Decision and Control, CDC 2022. Institute of Electrical and Electronics Engineers Inc., p. 3213-3218 6 p. (Proceedings of the IEEE Conference on Decision and Control; vol. 2022-December).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Drug therapy 100%
  • Drug Resistance 97%
  • Tumors 65%
  • Drugs 64%
  • Tumor 45%

• OPTIMIZE WAV2VEC2S ARCHITECTURE FOR SMALL TRAINING SET THROUGH ANALYZING ITS PRE-TRAINED MODELS ATTENTION PATTERN

  Chen, L., Asgari, M. & Dodge, H. H., 2022, 2022 IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2022 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 7112-7116 5 p. (ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings; vol. 2022-May).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Speech recognition 100%
  • Experiments 18%
  2 Scopus citations

• Panoramic Retinal Optical Coherence Tomography

  Jian, Y., Ni, S., Nguyen, T. T. P., Skalet, A. & Campbell, P. J., 2022, 2022 IEEE Photonics Conference, IPC 2022 - Proceedings. Institute of Electrical and Electronics Engineers Inc., (2022 IEEE Photonics Conference, IPC 2022 - Proceedings).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Optical Coherence Tomography 100%
  • Retina 76%
  • Optical tomography 70%
  • retina 59%
  • field of view 56%

• Prediction of Future Health Care Utilization

  Dorr, D. A., King, T. & Quiñones, A., Jun 6 2022, MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation - Proceedings of the 18th World Congress on Medical and Health Informatics. Otero, P., Scott, P., Martin, S. Z. & Huesing, E. (eds.). IOS Press BV, p. 1090-1091 2 p. (Studies in Health Technology and Informatics; vol. 290).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Patient Acceptance of Health Care 100%
  • Health care 84%
  • Natural Language Processing 62%
  • Health 61%
  • Multimorbidity 56%

• Social Robots to Support Assisted Living for Persons with Alzheimer’s and Related Dementias

  Morris, T., Dodge, H., Cerel-Suhl, S. & Zhao, X., 2022, Social Robotics - 14th International Conference, ICSR 2022, Proceedings. Cavallo, F., Cabibihan, J-J., Fiorini, L., Sorrentino, A., He, H., Liu, X., Matsumoto, Y. & Ge, S. S. (eds.). Springer Science and Business Media Deutschland GmbH, p. 228-237 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13818 LNAI).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Dementia 100%
  • Social robots 92%
  • Assisted living 88%
  • Robot 82%
  • Person 68%

• The advantages and disadvantages of novel contrast agent types for fluorescence guided surgery

  Barth, C. W. & Gibbs, S. L., 2022, Molecular-Guided Surgery: Molecules, Devices, and Applications VIII. Gioux, S., Gibbs, S. L. & Pogue, B. W. (eds.). SPIE, 1194309. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11943).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Fluorescence 100%
  • surgery 98%
  • Contrast Medium 97%
  • Surgery 88%
  • Contrast Media 80%

• The Post-Stroke Speech Transcription (PSST) Challenge

  Gale, R. C., Fleegle, M., Fergadiotis, G. & Bedrick, S., 2022, Proceedings - 4th RaPID Workshop: Resources and Processing of Linguistic, Para-Linguistic and Extra-Linguistic Data from People with Various Forms of Cognitive/Psychiatric/Developmental Impairments, as part of the 13th Edition of the Language Resources and Evaluation Conference, LREC 2022. Kokkinakis, D., Themistocleous, C. K., Fors, K. L., Tsanas, A. & Fraser, K. C. (eds.). European Language Resources Association (ELRA), p. 41-55 15 p. (Proceedings - 4th RaPID Workshop: Resources and Processing of Linguistic, Para-Linguistic and Extra-Linguistic Data from People with Various Forms of Cognitive/Psychiatric/Developmental Impairments, as part of the 13th Edition of the Language Resources and Evaluation Conference, LREC 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • stroke 100%
  • Transcription 86%
  • Challenger 85%
  • Phoneme 48%
  • Phonemic Transcription 40%
  3 Scopus citations

• The Role of Informatics in Implementing Guidelines for Chronic Opioid Therapy Risk Assessment in Primary Care: A Narrative Review Informed by the Socio-Technical Model

  Mishra, M., Pickett, M. & Weiskopf, N. G., Jun 6 2022, MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation - Proceedings of the 18th World Congress on Medical and Health Informatics. Otero, P., Scott, P., Martin, S. Z. & Huesing, E. (eds.). IOS Press BV, p. 447-451 5 p. (Studies in Health Technology and Informatics; vol. 290).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Informatics 100%
  • Risk assessment 76%
  • Opioid Analgesics 69%
  • Risk Assessment 65%
  • Primary Health Care 62%

• Ultra-widefield handheld swept-source OCT for peripheral retinal imaging

  Ni, S., Nguyen, T. T. P., Ng, R., Khan, S., Ostmo, S., Jia, Y., Chiange, M. F., Huang, D., Campbell, J. P. & Jian, Y., 2022, Ophthalmic Technologies XXXII. Hammer, D. X., Joos, K. M. & Palanker, D. V. (eds.). SPIE, 1194109. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11941).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Optical tomography 100%
  • Retinal 84%
  • Pathology 83%
  • Imaging systems 77%
  • Optical Coherence Tomography 73%

• Volumetric measurement of Henle's fiber layer and outer nuclear layer thickness using directional optical coherence tomography

  Khan, S., Ni, S., Nguyen, T. T. P., Ng, R., Lujan, B. J., Tan, O., Huang, D. & Jian, Y., 2022, Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XXVI. Izatt, J. A. & Fujimoto, J. G. (eds.). SPIE, 1194802. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11948).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Optical tomography 100%
  • Pupil 79%
  • Optical Coherence Tomography 73%
  • Retina 63%
  • tomography 57%
• 2021

  A method for validating depth-resolved biodistributions in topically-stained specimen with multi-channel fluorescence cryo-imaging.

  Byrd, B. K., Strawbridge, R. S., Wells, W., Barth, C., Gibbs, S. & Davis, S. C., 2021, Molecular-Guided Surgery: Molecules, Devices, and Applications VII. Gioux, S., Gibbs, S. L. & Pogue, B. W. (eds.). SPIE, 116250X. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11625).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Fluorescence 100%
  • Optical Imaging 95%
  • staining 85%
  • Tumor Biomarkers 73%
  • biomarkers 69%

• An AI-Powered Tool for Automatic Heart Sound Quality Assessment and Segmentation

  Roquemen-Echeverri, V., Jacobs, P. G., Heitner, S., Schulman, P. M., Wilson, B., Mahecha, J. & Mosquera-Lopez, C., 2021, Proceedings - 2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021. Huang, Y., Kurgan, L., Luo, F., Hu, X. T., Chen, Y., Dougherty, E., Kloczkowski, A. & Li, Y. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 3065-3074 10 p. (Proceedings - 2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Quality Assessment 100%
  • Heart Sounds 90%
  • Segmentation 73%
  • Acoustic waves 50%
  • Datasets 30%
  2 Scopus citations

• An invertible transform for efficient string matching in Labeled Digraphs

  Nellore, A., Nguyen, A. & Thompson, R. F., Jul 1 2021, 32nd Annual Symposium on Combinatorial Pattern Matching, CPM 2021. Gawrychowski, P. & Starikovskaya, T. (eds.). Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 20. (Leibniz International Proceedings in Informatics, LIPIcs; vol. 191).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Labels 100%
  4 Scopus citations

• Crisis ventilator: A 3D printed option for pressure controlled ventilation

  Brito, A., Fontaine, E., El Haddi, S. J. & Chi, A., 2021, Proceedings of the 2021 Design of Medical Devices Conference, DMD 2021. American Society of Mechanical Engineers, V001T04A008. (Proceedings of the 2021 Design of Medical Devices Conference, DMD 2021).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Ventilation 100%
  • Pressure control 63%
  • Raw materials 49%

• Deep Neural Network Trained on Surface ECG Improves Diagnostic Accuracy of Prior Myocardial Infarction over Q Wave Analysis

  Yildirim, O., Baloglu, U. B., Talo, M., Ganesan, P., Tung, J. S., Kang, G., Tooley, J., Alhusseini, M. I., Baykaner, T., Wang, P. J., Perez, M. V., Tereshchenko, L., Narayan, S. M. & Rogers, A. J., 2021, 2021 Computing in Cardiology, CinC 2021. IEEE Computer Society, (Computing in Cardiology; vol. 2021-September).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Electrocardiography 100%
  • Deep neural networks 98%
  • Myocardial Infarction 74%
  • Screening 47%
  • Cardiology 36%
  2 Scopus citations

• Federated Adversarial Debiasing for Fair and Transferable Representations

  Hong, J., Zhu, Z., Yu, S., Wang, Z., Dodge, H. H. & Zhou, J., Aug 14 2021, KDD 2021 - Proceedings of the 27th ACM SIGKDD Conference on Knowledge Discovery and Data Mining. Association for Computing Machinery, p. 617-627 11 p. (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Communication 100%
  • Costs 75%
  23 Scopus citations

• Identification of Cancer Cell Population Dynamics Leveraging the Effect of Pre-Treatment for Drug Schedule Design

  Wiggert, M., Turnidge, M., Cohen, Z., Langer, E. M., Sears, R. C., Chapman, M. P. & Tomlin, C. J., May 25 2021, 2021 American Control Conference, ACC 2021. Institute of Electrical and Electronics Engineers Inc., p. 1909-1916 8 p. 9482989. (Proceedings of the American Control Conference; vol. 2021-May).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Population dynamics 100%
  • Cells 66%
  • Drug interactions 35%
  • Toxicity 26%
  • Controllers 24%

• Investigation of Machine Learning and Deep Learning Approaches for Detection of Mild Traumatic Brain Injury from Human Sleep Electroencephalogram

  Vishwanath, M., Jafarlou, S., Shin, I., Dutt, N., Rahmani, A. M., Jones, C. E., Lim, M. M. & Cao, H., 2021, 43rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2021. Institute of Electrical and Electronics Engineers Inc., p. 6134-6137 4 p. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Deep Learning 100%
  • Brain Concussion 92%
  • Machine Learning 82%
  • Sleep 76%
  • Electroencephalography 69%
  3 Scopus citations

• Learning-based Image Registration with Meta-Regularization

  Al Safadi, E. & Song, X., 2021, Proceedings - 2021 IEEE/CVF Conference on Computer Vision and Pattern Recognition, CVPR 2021. IEEE Computer Society, p. 10923-10932 10 p. (Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Image registration 100%
  • Hilbert spaces 39%
  • Ablation 36%
  • Experiments 10%
  3 Scopus citations

• Refocusing on Relevance: Personalization in NLG

  Dudy, S., Bedrick, S. & Webber, B., 2021, EMNLP 2021 - 2021 Conference on Empirical Methods in Natural Language Processing, Proceedings. Association for Computational Linguistics (ACL), p. 5190-5202 13 p. (EMNLP 2021 - 2021 Conference on Empirical Methods in Natural Language Processing, Proceedings).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Personalization 100%
  • Relevance 53%
  • Information retrieval 53%
  • Text 51%
  • Hazards 49%
  10 Scopus citations

• Strategies to Reduce Long-Term Drug Resistance by Considering Effects of Differential Selective Treatments

  Ghodsi Asnaashari, T. & Chang, Y. H., 2021, Mathematical and Computational Oncology - Third International Symposium, ISMCO 2021, Proceedings. Bebis, G., Gaasterland, T., Kato, M., Kohandel, M. & Wilkie, K. (eds.). Springer Science and Business Media Deutschland GmbH, p. 49-60 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13060 LNBI).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Drug Resistance 100%
  • Tumors 66%
  • Tumor 59%
  • Strategy 45%
  • Cancer 19%